Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000189.1 Length=34094 Score E Sequences producing significant alignments: (Bits) Value seq7310 167 5e-37 >seq7310 Length=770 Score = 167 bits (184), Expect = 5e-37 Identities = 268/379 (71%), Gaps = 11/379 (3%) Strand=Plus/Plus Query 11001 GCCTACGAGCAGACGGTACGCGAGGAGGTCAACTTCCAAAAGACCTTCAACAACAACGTG 11060 || ||||| || ||||| | ||||| | ||||| | || | ||| | |||| ||||| Sbjct 66 GCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAACCACGTG 124 Query 11061 CGCACCCTGGTGAGCCGGGACGAGGTGACCATGGGACTGATGCACCTGTGGGACTTTGTG 11120 ||||| || ||| || || |||||| | || |||||||||| |||||||||||||| Sbjct 125 CGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTTGTA 184 Query 11121 GAGGCCTTCCTGCAGCAC--CCCCGGTCCCGCGC-GCTGACCGCGCAGCTGCTGCTGATC 11177 || ||| |||| ||| | | || ||| | ||||||||| | || || Sbjct 185 ATCGCG---CTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATA 241 Query 11178 GCGCAGCACTGCCGGGACGAGG--GCATGGTGAAGGAGGCGCTGCTGAGCCTGGGCGCGC 11235 | ||||||| | ||||| | | |||| | | ||| |||||||| | | | | | || Sbjct 242 GTGCAGCACACCAGGGACAACGAGGCAT--TCAGGGATGCGCTGCTAAACATAGTAGAGC 299 Query 11236 CCGAGAGCCGCTGGCTGGTGGACCTGGTGAACCTGCTCCAGACCATTGTGGTGCAGGAGC 11295 ||||| ||||||||||| | || || | ||| | || |||| ||| ||||||||||||| Sbjct 300 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC 359 Query 11296 GGTCCATGAGCCTGAGCGAGAAGGTGGCGGCCATCAACTACTCGGTGGCGACCCTGGCCA 11355 | | |||||||| || |||||||| ||||| ||||| || || | |||| || Sbjct 360 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 419 Query 11356 AGCACTACGCGCGCAAGAT 11374 || ||||| |||||||| Sbjct 420 AGTTTTACGCCCGCAAGAT 438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108909161792640