Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000191.1 Length=34185 Score E Sequences producing significant alignments: (Bits) Value seq7310 143 6e-30 >seq7310 Length=770 Score = 143 bits (158), Expect = 6e-30 Identities = 318/474 (67%), Gaps = 5/474 (1%) Strand=Plus/Plus Query 10794 AGGAGGTCAACTTCCAAAAGACATTTAATAATAATGTTCGAACACTGGTGGCCAGGGAAG 10853 ||||| | ||||| | || | |||| || | || || || || ||||| | || | Sbjct 88 AGGAGATTAACTTTCTGAAAGC-TTTACCAACCACGTGCGCACGCTTGTGGCACGCGAGG 146 Query 10854 AAGTGGCAGTGGGGCTCATGCATTTGTGGGACTTTGTTGAGGCGTACGTTGTAAATCCAT 10913 | ||||| | | || |||||| ||||||||||||| ||| | ||| ||| Sbjct 147 AGGTGGCTATACGACTGATGCATCTGTGGGACTTTGTAATCGCGCTGGAGCAAAACCCAA 206 Query 10914 CTTCCAAAGCTTTAACTGCCCAGCTATTTCTTATTGTCCAACACTGCCGCGACGA--AGG 10971 | ||| | | | || ||||| || ||||| || || ||| | | ||| | ||| Sbjct 207 ATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAGTGCAGCACACCAGGGACAACGAGG 266 Query 10972 CATTCTAAAGGAATCGCTGTTGAACATTGCAGAGCCAGAGAGCAGGTGGCTGTTAGATCT 11031 ||||| | ||| ||||| | ||||| | |||||| ||| || | |||||| | ||| | Sbjct 267 CATTC--AGGGATGCGCTGCTAAACATAGTAGAGCCCGAGGGCCGCTGGCTGCTCGATTT 324 Query 11032 AATAAATCTGCTCCAAACGATAGTGGTTCAAGAACGGGGCATGTCCATTACAGAAAAGGT 11091 ||||| | || || | |||||||| || || || || || | | | || ||||| Sbjct 325 GATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCAGCTTGAGCCTGGCTGACAAGGT 384 Query 11092 GGCCGCCATTAACTATTCTGTAATAACTCTCAGCAAGCATTATGCCAGGAAAGTTTATAG 11151 |||||||||||||||||| | | | ||| ||||| ||| ||| | || | || Sbjct 385 GGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGTTTTACGCCCGCAAGATATACCA 444 Query 11152 GACTCCGTTTGTCCCCATTGACAAGGAAGCAAAGATCACCACTTTTTACATGCGAATTGT 11211 || || | || ||||| |||||||| | ||||||| || |||||||| || | Sbjct 445 TACCCCTTACGTTCCCATAGACAAGGAGGTAAAGATCGAGGGGTTCTACATGCGCATGGC 504 Query 11212 GGTTAAACTGTTGGTGTTGAGCGATGACTTGGGCATGTATCGTAATGAGCGCAT 11265 | | || || | |||||||| ||| || || | ||||| || |||||||| Sbjct 505 GTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCGTTTATCGCAACGAGCGCAT 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109200174645680