Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq46528 86.0 1e-11 >seq46528 Length=129674 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | |||| |||||| |||||||||||||||| Sbjct 2998 GCCCGGCTAGCTCAGTCGGTAGAGCATCGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 2939 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2938 CCCACGTTGGGC 2927 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | |||| |||||| |||||||||||||||| Sbjct 4027 GCCCGGCTAGCTCAGTCGGTAGAGCATCGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 3968 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3967 CCCACGTTGGGC 3956 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | |||| |||||| |||||||||||||||| Sbjct 6662 GCCCGGCTAGCTCAGTCGGTAGAGCATCGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 6603 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6602 CCCACGTTGGGC 6591 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 16154 GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCATGGTCGTGGGTTCGAGC 16095 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 16094 CCCACGTTGGGC 16083 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||| Sbjct 33887 GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 33828 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 33827 CCCACGTTGGGC 33816 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||| Sbjct 81994 GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 81935 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 81934 CCCACGTTGGGC 81923 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 88261 GCCCGTCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 88202 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 88201 CCCACGTTGGGC 88190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057090491615600