Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq51154 93.3 3e-14 >seq51154 Length=75708 Score = 93.3 bits (102), Expect = 3e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 102089 CCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCC 102148 ||||| ||||| || | || || |||||| |||| ||||||||||| |||||| Sbjct 43302 CCTTCTTCTCTTTCTTGAAGTCCTCTACTATCTAGAAATTCCCTAGATCCATTGGCATCC 43243 Query 102149 CAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCAC 102208 || ||||| ||| | |||| ||||||| | || || ||| | |||||||| Sbjct 43242 CAGATGTGAACGTTTTTATCGGATAACTCTTTGGCATTGGTGGAGCCTTTTATAAACCAT 43183 Query 102209 AACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 | | ||||| | ||||| | |||||||||||| ||||| ||||| | |||||| Sbjct 43182 ATTAACTCTTCTGCCACACCACGCCAAAATACTCTTTTAGTTGTTAACAATGGAAA 43127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361012923224120