Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_001454.1 Length=34214 Score E Sequences producing significant alignments: (Bits) Value seq7310 517 2e-142 >seq7310 Length=770 Score = 517 bits (572), Expect = 2e-142 Identities = 522/676 (77%), Gaps = 5/676 (1%) Strand=Plus/Plus Query 10676 GGTAACCGCGTACGAGCAAACGGTGAACGAGGAGCGCAACTTTCAGAAAAGTTTTAACAA 10735 ||||||||||||||| || ||||||||| ||||| ||||||| |||| | |||| ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAA-GCTTTACCAA 117 Query 10736 TCACGTGCGCACCCTGGTGGCGCGCGAGGAGGTGGCCATTGGGCTGATGCATTTGTGGGA 10795 ||||||||||| || ||||| |||||||||||||| || | ||||||||| ||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 10796 CTTTATGGAGGCGTACGTGCAAAATCCTTCGAGCAAGCCGCTGACGGCGCAGCTGTTTTT 10855 |||| | ||| | |||||| || ||||||||||| | |||||||||||| | Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 10856 GATTGTGCAACACAGCCGGGACAACGAGGCTTTCCGCGAGGCCATGCTGAATATTGCGGA 10915 || ||||| |||| | ||||||||||||| ||| | || || |||| || || | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 10916 GCCTGAGGGTCGCTGGCTTTTGGACCTGGTTAATATCCTTCAGAGCATTGTGGTACAGGA 10975 ||| ||||| |||||||| | || || | || || || |||||||| ||||| ||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 10976 GCGCAGTCTAAGCCTGGCCGACAAGGTGGCGGCCATTAATTACAGCATGCTTAGCCTCGG 11035 |||||| | |||||||| ||||||||||| |||||||| || |||||| || || || Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11036 CAAGTTTTACGCCCGCAAGATTTACAAAACCCCCTATGTGCCCATAGACAAGGAGGTTAA 11095 ||||||||||||||||||||| ||| | ||||| || || ||||||||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11096 AATAGATAGCTTTTACATGCGCATGGCGCTAAAGGTGTTAACGCTGAGTGACGATCTGGG 11155 || || | || ||||||||||||||| | |||||| | || |||| ||||| ||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11156 GGTGTACCGCAACGACCGTATTCACAAA-GCTGTGAGCGCCAGCCGCCGTCGCGAGCTTA 11214 || || |||||||| || || |||||| || ||||||| ||||| || |||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11215 GCGACCGCGAACTAATGCACAGCCTGCGTCGGGCTCTAACGGGCACCGGCA---CTGATG 11271 |||||||||| || ||||||||||||| |||| || | ||||| |||| ||| Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 11272 CCGAAACTGAATCTTACTTTGACATGGGGGCGGACCTGCAATGGCAGCCCAGCGCCCGGG 11331 || | || || ||||||||| ||| || ||||||| ||| || ||| || | Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 11332 CCCTGGAGGCGGCTGG 11347 ||||| | || ||||| Sbjct 718 CCCTGTAAGCAGCTGG 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109292915005440