Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq51154 86.0 5e-12 seq50591 84.2 2e-11 seq7096 84.2 2e-11 >seq51154 Length=75708 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||| ||||| ||||| ||||| |||||||| |||||||| |||| ||| Sbjct 45976 GGTGACTTGGGGCCTGTTTATGGCTTTCAGTGGAGACACTTTGGAGCGCAATACAAAGAC 46035 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| | | |||||| ||||| ||||||||||| || ||||| | || Sbjct 46036 ATGCATAGTGATTATTCCAATCAAGGTATAGATCAATTAGCGAACGTTATAGAAACCATC 46095 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATT 20367 ||||| || ||| | || |||||||||||| Sbjct 46096 AAAACAAATCCACATGATAGAAGAATTATT 46125 >seq50591 Length=824 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGAT-TGCAC 20548 ||| || ||||||||||| || ||||| |||||||| | || || |||||||| ||| | Sbjct 712 GGGTCTTGGTGTTCCTTTTAACATTGCTAGTTATGCATTACTGACCTATATGATATGC-C 654 Query 20549 ATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACC 20608 |||| || | || ||| | || || || || || || || || || || ||| | ||| Sbjct 653 ATGTGACTGGTTATAAACCTGGAGATTTTGTACATACTATGGGTGATGCACATGTGTACT 594 Query 20609 TTAATCATATAGAACCTTTAAAATTACAGTTAA 20641 |||||| | ||||| || ||| |||| ||| Sbjct 593 CCAATCATGTTGAACCATTGAAACAACAGGTAA 561 >seq7096 Length=490 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGAT-TGCAC 20548 ||| || ||||||||||| || ||||| |||||||| | || || |||||||| ||| | Sbjct 113 GGGTCTTGGTGTTCCTTTTAACATTGCTAGTTATGCATTACTGACCTATATGATATGC-C 171 Query 20549 ATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACC 20608 |||| || | || ||| | || || || || || || || || || || ||| | ||| Sbjct 172 ATGTGACTGGTTATAAACCTGGAGATTTTGTACATACTATGGGTGATGCACATGTGTACT 231 Query 20609 TTAATCATATAGAACCTTTAAAATTACAGTTAA 20641 |||||| | ||||| || ||| |||| ||| Sbjct 232 CCAATCATGTTGAACCATTGAAACAACAGGTAA 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398920703223400