Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3179 114 3e-20 >seq3179 Length=6207 Score = 114 bits (126), Expect = 3e-20 Identities = 298/446 (67%), Gaps = 15/446 (3%) Strand=Plus/Minus Query 101915 ATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTC 101974 ||||| || || || || |||||||| || || ||| ||| |||| | | || || Sbjct 3525 ATTGTAGCTTTCGCGGCCGTTGAAGGTATATTTTTTTCGGGTTCATTTGGCGCTATATTT 3466 Query 101975 TGGATCAAGAACAGG-GGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAG 102033 ||| | ||||||| |||||||| | ||| | || | || ||||| | |||||||| Sbjct 3465 TGGCT-AAGAACAAAAGGTATTTTACACGGTTTGACTTTTTCAAATGAACTTATTTCTAG 3407 Query 102034 GGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATAC 102093 ||| |||||| | ||| |||| |||||||| || |||||||||| ||||| | | Sbjct 3406 GGATGAAGGTTTACATTGCGATTTTGCATGTTTGATGTTGAAAAA---AATTGTTAACAA 3350 Query 102094 CCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 || | | ||||| | | ||||| | |||||| ||||| |||||| |||| || Sbjct 3349 GCCGTGTAAAGAAAAACATTGTCAAATTATTGATGAAGCAGTCCGGATTGAAAAAGAGTT 3290 Query 102154 TCTCACAG----TTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209 | | |||| ||| || | | | | || | ||||| ||| || ||||| | Sbjct 3289 TTTGACAGAAGCTTTACC-GACGG---ACTTGATTGGAATTAACGCAAAACTGATGTCGC 3234 Query 102210 AGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACT-AGAAAAGCACTAT 102268 | || |||||||| | || |||| ||| ||| | ||| | |||| || ||| || Sbjct 3233 AATATATTGAATTCATTGCCGATAGACTGTTGCTGGAACT-TGACTGCGATAAGATATAC 3175 Query 102269 AATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTT 102328 || | ||| || |||| |||||||| | || || |||| || || | ||| Sbjct 3174 AACAGTCACAATCCGTTCCATTTCATGGATATGATCTCAATCGAAGGAAAAACTATTTTT 3115 Query 102329 TTTGAAAAGAGAGTCGCCGAGTATCA 102354 || |||| ||||| | || ||||| Sbjct 3114 TTCGAAAGAAGAGTTGGTGAATATCA 3089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988897810084600