Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_003266.2 Length=35994 Score E Sequences producing significant alignments: (Bits) Value seq7310 466 4e-127 >seq7310 Length=770 Score = 466 bits (516), Expect = 4e-127 Identities = 510/673 (76%), Gaps = 11/673 (2%) Strand=Plus/Plus Query 11214 GGTCACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAA 11273 ||| || |||||||| || || ||||| |||||| ||||| | ||| | || | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCTTT-ACCAA 117 Query 11274 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGA 11333 |||||||||||| || | || |||||||||||| | | | |||||||| |||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11334 CCTGCTGGAGGCCATTGTGCAGAACCCCACCAGCAAACCGCTGACGGCGCAGCTGTTCCT 11393 | | | || | | ||| ||||| | ||||| ||||| | ||||||||||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11394 GGTGGTGCAGCACAGTCGGGACAACGAGACTTTTAGGGAGGCGCTGCTGAATATCACCGA 11453 | |||||||||| ||||||||||| | || ||||| |||||||| || || || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11454 GCCCGAGGGCCGCTGGCTTCTGGACCTGGTGAATATTCTGCAGAGCATCGTGGTGCAGGA 11513 |||||||||||||||||| || || || | || |||||||||||||| ||||||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11514 GCGCGGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTTTCGGTGCTGAGTTTGGG 11573 |||| | || ||| | || ||| |||| ||||| |||| ||| |||| ||| |||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11574 CAAGTACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGAA 11633 ||||| ||||| | ||||| ||| | ||||| ||||| ||||||||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11634 GATCGACGGGTTTTACATGCGCATGACCCTGAAAGTGCTGACCCTGAGCGACGATCTGGG 11693 |||||| ||||| |||||||||||| | |||| ||||| ||| |||||||||| ||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11694 GGTGTACCGCAACGACAGGATGCGC-CGCGCGGTAAGCGCCAGCAGGCGGCGCGAGCTGA 11752 || || |||||||| | || | | || || |||| ||| ||||||||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11753 GCGATCAGGAGCTGATGCACAGCCTGCAGCGGGCCCTGAC-----CGGG--GCCGGGACC 11805 |||| | |||||||||||||||||||| |||||||| | |||| || | || Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 11806 GAGGGG--GAGAGCTACTTTGACATGGGCGCGGACCTGCACTGGCAGCCCAGCCGCCGGG 11863 ||| || ||| |||||||||| |||||| ||||||| |||| || |||| || | Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 11864 TCTTGGAAGCCGC 11876 | || |||| || Sbjct 718 CCCTGTAAGCAGC 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114985254328640