Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq43701 82.4 8e-11 >seq43701 Length=19211 Score = 82.4 bits (90), Expect = 8e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 156767 GCCAGTTCGTAACTGGCCTCGAGCGCAGCATGATACACAGTTTCAGCAATTTGTTTATTC 156826 |||| ||| ||||||| | | ||| | | ||| | ||||||| ||||||||||||| Sbjct 13300 GCCAATTCACAACTGGCTTTCAAGGCACCGTAATATATAGTTTCAAAAATTTGTTTATTC 13359 Query 156827 AATAGAACGGCAGCATCGCTCACGTACGGTATGCGCAACATAACAAATGCATCGGCCAAA 156886 |||| | || |||| || | | || | | || | | ||||||||| || | | Sbjct 13360 AATAACATTGCTTCATCACTGTCAAAGGGAAACCTCATTAATATAAATGCATCAGCAAGA 13419 Query 156887 CCTTGAATGCCAATGCCGATGGGACGATGGCGCATATT 156924 || |||| ||||| || ||||||||||| |||||||| Sbjct 13420 CCCTGAACACCAATACCAATGGGACGATGTCGCATATT 13457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506671404758400