Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq51154 105 8e-18 >seq51154 Length=75708 Score = 105 bits (116), Expect = 8e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATA 7122 |||||||| || ||||| | ||| | |||||||| |||||||||||| | || |||| Sbjct 46142 GGATTCCATGCTGTCATAATAATTCTTCTATCATGTGGATTTGTTTTGATGGTTTCTATA 46083 Query 7123 ATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTA 7182 | | ||||||||||||||| ||| ||||| | |||| | | | || | Sbjct 46082 ACGTTCGCTAATTGATCTATACCTTGATTGGAATAATCACTATGCATGTCTTTGTATTGC 46023 Query 7183 GCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 |||||||| |||||||| ||||| ||||||| ||| || || |||||| Sbjct 46022 GCTCCAAAGTGTCTCCACTGAAAGCCATAAACAGGCCCCAAGTCACCT 45975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595468892592000