Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_006144.1 Length=34246 Score E Sequences producing significant alignments: (Bits) Value seq7310 522 6e-144 >seq7310 Length=770 Score = 522 bits (578), Expect = 6e-144 Identities = 526/677 (78%), Gaps = 10/677 (1%) Strand=Plus/Plus Query 10877 GGTGAGCGCGTACGAGCAAACGGTCAAGGAGGAGATGAACTTCCAGAAGAGCTTCAATCA 10936 ||| | ||||||||| || ||||| || ||||||| ||||| | ||| ||||| | | Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAA 117 Query 10937 TCACGTGCGCACGCTGATCGCGCGCGAAGAGGTGGCGATTGGCCTCATGCATCTGTGGGA 10996 |||||||||||||| | || ||||| |||||||| || | || |||||||||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 10997 TTTTGTGGAGGCGTACGTTCAGAACCCCAGCAGCAAGCCGCTGACGGCTCAGCTGTTCCT 11056 ||||| ||| | || ||||| | ||||||||||| | ||| ||||||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11057 CATCGTGCAACACAGTCGGGACAACGAGACGTTCAGGGAGGCCATGCTGAACATCGCGGA 11116 || ||||| |||| ||||||||||| | |||||||| || |||| ||||| | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11117 GCCGGAGGGGCGCTGGCTCTTGGATCTCATTAACATCTTGCAGAGTATCGTAGTGCAGGA 11176 ||| ||||| |||||||| | ||| | || ||||| ||||||| || || |||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11177 GCGCTCGCTT-AGCCTGGCCGACAAGGTGGCCGCCATCAACTACAGCATGCTGTCGCTGG 11235 |||| |||| |||||||| ||||||||||||||||| ||||| |||||| |||| Sbjct 358 GCGC-AGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGG 416 Query 11236 GCAAATTTTACGCCCGCAAAATCTACAAGTCTCCGTTCGTCCCCATCGACAAGGAGGTGA 11295 |||| |||||||||||||| || ||| | | || | ||| ||||| ||||||||||| | Sbjct 417 GCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAA 476 Query 11296 AGATAGACAGCTTTTACATGCGCATGGCGCTCAAGGTGCTGACTCTAAGCGACGACCTGG 11355 |||| || | || ||||||||||||||| | |||||||| || | |||||||||||| Sbjct 477 AGATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGA 536 Query 11356 GTGTGTACCGCAACGACCGCATCCAC-AAGGCGGTGAGCGCCAGCCGCCGGCGCGAGCTG 11414 | || || |||||||| ||||||||| ||||| ||||||| ||||| ||||||||||| Sbjct 537 GCGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTC 596 Query 11415 AGCGACCGCGAGCTTTTGCACAGCCTGCATCGGGCGTTGACTGGTGCCGGCAGCGCCGA- 11473 |||||||||||||| ||||||||||||| |||| || |||| | ||||||| ||| Sbjct 597 AGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGAT 656 Query 11474 --GGCGGCCGA---CTACTTTGACGCCGGAGCGGACTTGCGCTGGCAGCCATCCCGACGC 11528 | |||||| |||||||||||| || || ||| |||||||| ||| || |||| Sbjct 657 AGAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGC 716 Query 11529 GCGCTGGCGGCGGCTGG 11545 || ||| || ||||| Sbjct 717 GCCCTGTAAGCAGCTGG 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109395249195520