Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq14214 185 2e-42 >seq14214 Length=808 Score = 185 bits (204), Expect = 2e-42 Identities = 401/591 (68%), Gaps = 8/591 (1%) Strand=Plus/Plus Query 27139 CGGATACGGCCGCCGATGCGCCGCCCCGCCTTGCGCGGATCGGCAATAGCGATCAC-CTG 27197 ||||| |||||||||||||| || |||||| | || | ||||| | |||||| ||| Sbjct 208 CGGATGCGGCCGCCGATGCGGCGGCCCGCCAGGTGCTGGTCGGCCACGCGGATCACGCTG 267 Query 27198 CCCCGGACCGAC-CAGCACGCCGTCCATGCCGACCTGAAACGACACCGTTCCCGCCTCGT 27256 ||| || | || | ||| || |||| ||||||| |||| |||| | || ||| Sbjct 268 CCC-GGCCGCACGCGGCAGGCA-TCCAGGCCGACCGAGAACGTGACCGAGCGCGTCTCCA 325 Query 27257 ATCGCGACGTGAGCAAAATCCATTGGCCGACGCGATGTGCCTGCGCCTGCGACGTGCACC 27316 || || |||| ||||| | ||||| || || ||||| | |||| ||||| | Sbjct 326 GGTTGGAGGTCAGCAGCATCCACTTGCCGATCCGGTGCGCCTGGCCGCGCGAGGTGCAGC 385 Query 27317 CGAACGCAGTAACCTGCGTCTTAATGACGCCGTAGCGCGCGATCCCGTCTTCGTCCGGCA 27376 ||||| | || || | | || || || ||||||||||| || || || | | Sbjct 386 CGAACCCGGTCACTTCCACCTGCTGGATTCCATAGCGCGCGATGCCTTCGCGGTTCTCGA 445 Query 27377 CGTATTCAACGG-CTTGCTTGTACTGGTTCGC-CGGGTCGTTATAGCTGACGAGCGCGAC 27434 |||| || || || || | | |||| | |||||| || || ||||| || Sbjct 446 CGTACTCGACCTTCTGGC--GACCCATTTCGGACATGTCGTTCCAGGACACCAGCGCCAC 503 Query 27435 CGTGTACCGCGTCTTACGCTCGCTGCCGACATACCGGAACGAGCCATCGATCACGTTCGC 27494 ||||| ||||| | || | |||||| || ||| |||||||| |||||| || Sbjct 504 GGTGTAGCGCGTGGTCAGCGCCGAGCCGACGTAGTTGAAGCGGCCATCGACCACGTTGGC 563 Query 27495 CGCCGTGTACACGTACACCGGATCTGACGGCATGTCCGCCGATGCGACGACAGCTCCCGG 27554 || || | || ||| |||||||| ||||||||| ||||| |||| || || | Sbjct 564 CGACGAGAACGTGTAGACCGGATCGCCCGGCATGTCGGCCGAGGCGAACACGGCGGCGTT 623 Query 27555 CCCCCAGTAGGCGATGCCGCGGAACACGCTCGCGATGTCCTGCAACACCTTGAACGCGTC 27614 |||| || || ||||||||||| | | |||| |||||||| |||| | | ||||| Sbjct 624 GGCCCAATAAGCCATGCCGCGGAAAATGGAGGCGAAGTCCTGCACCACCCGGTAGGCGTC 683 Query 27615 GGCCGCCGACTGGATCACGCAGTTGCAGGCGAATCGCGGCTCGACGCCGCCTTTTCCGTC 27674 ||||||| || | | |||||||| ||| ||||| || ||||| ||||| Sbjct 684 GGCCGCCTGTTGCAGGTAGACGTTGCAGGTGAAGCGCGGTTCCTTTCCGCCGAAGCCGTC 743 Query 27675 CGACACCATCACATCGCAGTAGCGCGCGATTTCGTACAGCCCCCACTTGTC 27725 |||||| | ||||| ||||| |||| | |||||| ||||||||||| Sbjct 744 ATCGACCATCTCGTCGCAATAGCGGCCGATCTGGTACAGGCCCCACTTGTC 794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143325429093920