Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq50636 91.5 3e-13 >seq50636 Length=1010106 Score = 91.5 bits (100), Expect = 3e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 268535 TTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTT 268594 ||||| |||||||| | ||||||||||| | || | | || |||||||| || || Sbjct 137420 TTTTGTGGGATTTCCTGAACTTTGCCAAACATTTCACTGCTTGACGCTTGGTAAAATCTT 137479 Query 268595 GTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCA 268654 | | || || |||||||| ||| || || ||||| || | ||||| || | ||| Sbjct 137480 GCCTTCTTCTCTAGACCGCACGTTCTAATAGCGTCGAGTAACCTGAGAGTACCAACCCCA 137539 Query 268655 TCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCT 268694 || || || || ||||||||| ||| || |||||||||| Sbjct 137540 TCAACATCAGCAGTATACTCCCCCATTTCAAATGACACCT 137579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920998922446400