Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq29267 86.0 5e-12 >seq29267 Length=189138 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||| |||||| ||||| ||||||||| | ||||||||||| || || || Sbjct 14483 CTCAGGGTACGGCCATCTTCCAGTTGCTTACCAGCGAAAATGAGACGCTGCTGATCTGGT 14542 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| |||||||| ||||| ||| | | ||||| |||||| | | |||| Sbjct 14543 GGAATGCCCTCTTTGTCCTGGATCTTAGCTTTCACATTTTCAATGGTGTCTGATGGTTCG 14602 Query 114333 ACGTC 114337 || || Sbjct 14603 ACCTC 14607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419857284601440