Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_010956.1 Length=35083 Score E Sequences producing significant alignments: (Bits) Value seq7310 563 2e-156 >seq7310 Length=770 Score = 563 bits (624), Expect = 2e-156 Identities = 531/673 (79%), Gaps = 8/673 (1%) Strand=Plus/Plus Query 11027 GGTGACGGCCTACGAGCAGACGGTGAAGCAGGAGCGCAACTTCCAAAAGAGTTTCAACAA 11086 ||| || || ||||| || |||||||| |||||| ||||| | || || || | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAA 117 Query 11087 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGGCCCTGGGCCTGATGCACCTGTGGGA 11146 |||||||||||| || | || |||||||||||||| | | |||||||| |||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11147 CCTGGCGGAGGCCATCGTGCAGAACCCGGACAGCAAGCCTCTGACGGCGCAGCTGTTCCT 11206 | | | || | | ||| ||||| | |||||||| || | ||||||||||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11207 GGTGGTGCAGCACAGCAGGGACAACGAGGCGTTCAGGGAGGCACTGCTGAACATCGCCGA 11266 | |||||||||| ||||||||||||||| |||||||| || ||||| ||||| | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11267 GCCCGAGGGTCGCTGGCTGCTGGAGCTGATCAACATCTTGCAGAGCATCGTAGTGCAGGA 11326 ||||||||| ||||||||||| || |||| ||||| |||||||||| || |||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11327 GCGCAGCCTGAGCTTGGCCGAGAAGGTGGCGGCGATCAACTACTCGGTGCTGAGCCTGGG 11386 ||||||| ||||| |||| || |||||||| || || ||||| || |||| || ||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11387 CAAGTTTTACGCGCGCAAGATTTACAAGACGCCGTACGTGCCCATAGACAAGGAGGTGAA 11446 |||||||||||| |||||||| ||| | || || ||||| ||||||||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11447 GATAGACAGCTTTTACATGCGCATGGCGCTCAAGGTGCTGACGCTGAGCGACGACCTGGG 11506 ||| || | || ||||||||||||||| | |||||||| || |||||||||||||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11507 CGTGTACCGCAACGACCGCATCCAC-AAGGCCGTGAGCACGAGCCGGCGGCGCGAGCTAA 11565 ||| || |||||||| ||||||||| |||||||||||| |||||||||||||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11566 GCGACCGCGAGCTGATGCTGAGCCTGCGCCGGGCGCTGGTAGG---GGGCGCTGCCGGCG 11622 |||||||||||||||||| ||||||| |||| |||| || |||| | || Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 11623 GCGAG---GAGTCCTACTTCGACATGGGGGCGGACCTGCATTGGCAGCCGAGCCGGCGCG 11679 | ||| ||||||||||| ||| ||| || ||||||| ||| || |||| |||| Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 11680 CCTTGGAGGCCGC 11692 || || | || || Sbjct 718 CCCTGTAAGCAGC 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112071927854800