Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_011202.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq7310 320 4e-83 >seq7310 Length=770 Score = 320 bits (354), Expect = 4e-83 Identities = 424/584 (73%), Gaps = 6/584 (1%) Strand=Plus/Plus Query 11073 GTATCGGCTTACGAGCAGACAGTAAAGGAAGAGCGTAACTTCCAAAAGTCTTTTAATAAT 11132 ||| | || ||||| || || || || | ||| |||||| | || |||| | || Sbjct 60 GTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCTTT-ACCAAC 118 Query 11133 CATGTGCGAACCCTGATTGCCCGCGAAGAAGTTACCCTTGGTTTGATGCATTTGTGGGAT 11192 || ||||| || || | || ||||| || || | | | |||||||| ||||||| Sbjct 119 CACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGAC 178 Query 11193 TTGATGGAA--GCTATCATTCAGAACCCTACTAGCAAACCTCTGACCGCCCAGCTGTTTC 11250 || || || || | || ||||| | |||||| || || | || |||||||| | Sbjct 179 TT--TGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCC 236 Query 11251 TGGTGGTGCAACACAGCAGAGACAATGAGGCTTTCAGAGAGGCGCTGCTGAACATCACCG 11310 | | ||||| |||| ||| ||||| ||||| ||||| || |||||||| ||||| | Sbjct 237 TTATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAG 296 Query 11311 AACCCGAGGGGAGATGGTTGTATGATCTTATCAACATTCTACAGAGTATCATAGTGCAGG 11370 | |||||||| | ||| || ||| | || |||||||| ||||| || | ||||||| Sbjct 297 AGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGG 356 Query 11371 AGCGGAGCCTGGGCCTGGCCGAGAAGGTGGCTGCCATCAATTACTCGGTTTTGAGCTTGG 11430 |||| ||| || ||||||| || |||||||| ||||| || || || | | || ||| Sbjct 357 AGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGG 416 Query 11431 GAAAATATTACGCTCGCAAAATCTACAAGACTCCATACGTTCCCATAGACAAGGAGGTGA 11490 | || | |||||| ||||| || ||| | || || ||||||||||||||||||||||| | Sbjct 417 GCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAA 476 Query 11491 AGATAGATGGGTTCTACATGCGCATGACGCTCAAGGTCTTGACCCTGAGCGATGATCTTG 11550 |||| || |||||||||||||||||| || | ||||| | ||| ||||||| || || Sbjct 477 AGATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGA 536 Query 11551 GGGTGTATCGCAATGACAGAATGCA-TCGCGCGGTTAGCGCCAGCAGGAGGCGCGAGTTA 11609 | || |||||||| || | || || || || |||| ||| || |||||||| | Sbjct 537 GCGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTC 596 Query 11610 AGCGACAGGGAACTGATGCACAGTTTGCAAAGAGCTCTGACTGG 11653 |||||| | || ||||||||||| ||||||| || ||| |||| Sbjct 597 AGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGG 640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111147722200640