Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_011203.1 Length=35343 Score E Sequences producing significant alignments: (Bits) Value seq7310 376 6e-100 >seq7310 Length=770 Score = 376 bits (416), Expect = 6e-100 Identities = 427/570 (75%), Gaps = 2/570 (0%) Strand=Plus/Plus Query 11298 GCCTACGAGCAGACCGTGAAGGAGGAGCGCAACTTCCAAAAATCTTTTAACAACCATGTG 11357 || ||||| || || ||||| ||||| ||||| | ||| |||| | |||||| ||| Sbjct 66 GCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCTTT-ACCAACCACGTG 124 Query 11358 CGCACCCTGATCGCCCGCGAGGAAGTGACCCTGGGTCTGATGCATCTGTGGGACCTGATG 11417 ||||| || | || |||||||| ||| | | | |||||||||||||||||| | | Sbjct 125 CGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTTGTA 184 Query 11418 GAGGCTATCGCCCAAAACCCCACTAGCAAACCACTGACAGCTCAGCTGTTTCTGGTGGTT 11477 || | | |||||||| | |||||| || || | || |||||||| || | || Sbjct 185 ATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAGTG 244 Query 11478 CAACATAGCAGGGACAACGAGGCATTCAGGGAGGCGTTGTTGAACATCACCGAGCCTGAT 11537 || || | |||||||||||||||||||||||| ||| || | ||||| ||||| || Sbjct 245 CAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCGAG 304 Query 11538 GGGAGATGGCTGTATGATCTGATCAACATCCTGCAAAGTATTATAGTGCAGGAACGTAGC 11597 || | |||||| ||| |||| ||||| ||||| || || | |||||||| || ||| Sbjct 305 GGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCAGC 364 Query 11598 CTGGGTTTGGCTGAGAAAGTGGCAGCTATCAACTACTCGGTCTTGAGCCTGGGCAAATAC 11657 || | ||||||| || ||||| || || ||||| || | | || |||||||| | Sbjct 365 TTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGTTT 424 Query 11658 TACGCTCGCAAGATCTACAAGACCCCCTACGTACCCATAGACAAGGAGGTGAAGATAGAT 11717 ||||| |||||||| ||| | ||||| ||||| ||||||||||||||||| ||||| || Sbjct 425 TACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGATCGAG 484 Query 11718 GGGTTTTACATGCGCATGACTCTGAAGGTGCTGACTCTGAGCGACGATCTGGGGGTGTAT 11777 ||||| |||||||||||| | |||||||||| || |||||||||| ||| | || ||| Sbjct 485 GGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCGTTTAT 544 Query 11778 CGCAATGACAGGATGCAC-CGCGCGGTGAGCGCCAGCAGGAGGCGCGAGCTGAGCGACAG 11836 ||||| || | || ||| || ||||||| ||| || |||||||||| |||||| | Sbjct 545 CGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGACCG 604 Query 11837 AGAACTTATGCACAGCTTGCAAAGAGCTCT 11866 || || ||||||||| ||||||| || || Sbjct 605 CGAGCTGATGCACAGCCTGCAAAGGGCCCT 634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112903393149200