Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_012959.1 Length=34920 Score E Sequences producing significant alignments: (Bits) Value seq7310 567 2e-157 >seq7310 Length=770 Score = 567 bits (628), Expect = 2e-157 Identities = 532/673 (79%), Gaps = 8/673 (1%) Strand=Plus/Plus Query 10960 GGTGACGGCCTACGAGCAGACGGTGAAACAGGAGCGCAACTTCCAAAAGAGTTTCAACAA 11019 ||| || || ||||| || |||||||| |||||| ||||| | || || || | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAA 117 Query 11020 CCACGTGCGCACCCTGATTGCGCGCGAGGAGGTGGCCCTGGGCCTGATGCACCTATGGGA 11079 |||||||||||| || | || |||||||||||||| | | |||||||| || ||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11080 CCTGGCGGAGGCCATCGTGCAAAACCCGGACAGCAAGCCTCTGACGGCGCAGCTGTTCCT 11139 | | | || | | ||||||||| | |||||||| || | ||||||||||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11140 GGTGGTGCAGCACAGCAGGGACAACGAGGCGTTTAGGGAGGCGCTGCTAAACATTGCCGA 11199 | |||||||||| ||||||||||||||| || ||||| |||||||||||||| | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11200 GCCCGAGGGTCGCTGGCTGCTGGAGCTGATTAACATCTTGCAGAGCATCGTAGTGCAGGA 11259 ||||||||| ||||||||||| || |||| ||||| |||||||||| || |||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11260 GCGCAGCCTGAGCCTGGCCGAGAAGGTGGCGGCGATCAACTACTCAGTGCTGAGCCTGGG 11319 ||||||| |||||||||| || |||||||| || || ||||| || |||| || ||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11320 CAAGTTTTACGCGCGCAAGATTTACAAGACGCCGTACGTGCCCATAGACAAAGAGGTGAA 11379 |||||||||||| |||||||| ||| | || || ||||| ||||||||||| ||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11380 GATAGACAGCTTTTACATGCGCATGGCGCTCAAGGTGCTGACGCTGAGCGACGACCTGGG 11439 ||| || | || ||||||||||||||| | |||||||| || |||||||||||||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11440 CGTGTACCGCAACGACCGCATCCAC-AAGGCCGTGAGCACAAGCCGGCGGCGCGAGCTGA 11498 ||| || |||||||| ||||||||| |||||||||||| ||||||||||||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11499 GCGACCGCGAGCTGATGCTGAGCCTGCGCCGGGC----GCTGGTAGGGG--GCGCCGCCA 11552 |||||||||||||||||| ||||||| |||| ||||| | ||| ||| || | Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 11553 GCGGCGAAGAGTCCCACTTTGACATGGGGGCGGACCTGCATTGGCAGCCGAGCCGGCGCG 11612 | | | |||||| |||||||| ||| || ||||||| ||| || |||| |||| Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 11613 CCTTGGAGGCCGC 11625 || || | || || Sbjct 718 CCCTGTAAGCAGC 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111550663074080