Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq14214 149 2e-31 >seq14214 Length=808 Score = 149 bits (164), Expect = 2e-31 Identities = 391/592 (66%), Gaps = 10/592 (2%) Strand=Plus/Minus Query 29917 GACAAGTGGGGGCTGTACGAAATTGCGCGGTATTGCGACGTCATGGTGTCGGACGGCAGA 29976 ||||||||||| |||||| | || | || |||||||||| ||||| |||||| Sbjct 794 GACAAGTGGGGCCTGTACCAGATCGGCCGCTATTGCGACGAGATGGTCGATGACGGCTTC 735 Query 29977 GGCGGCGTTGAACCGCGCTTCACGTGCAACTGCGTGATCCAGTCGGCCGCCGACGCGTAC 30036 ||||| |||||||||||||| |||||| | | || ||| |||||||| ||| Sbjct 734 GGCGGAAAGGAACCGCGCTTCACCTGCAACGTCTACCTGCAACAGGCGGCCGACGCCTAC 675 Query 30037 AAGGTGCTGCAAGATATTGCCAGCGTGTTCCGCGGCATTTCGTACTGGGGGCCGGGTGCG 30096 |||| |||| || | ||| | | ||||||||||| | || |||| | || Sbjct 674 CGGGTGGTGCAGGACTTCGCCTCCATTTTCCGCGGCATGGCTTATTGGGCCAACGCCGCC 615 Query 30097 GTAGTCGCTTCCGCGGACATGCCTTCCGATCCGGTCTACGTTTACACCGCGGCGAACGTG 30156 || |||| || || |||||||| ||||||||||||| | | | |||| |||||| Sbjct 614 GTGTTCGCCTCGGCCGACATGCCGGGCGATCCGGTCTACACGTTCTCGTCGGCCAACGTG 555 Query 30157 ATCGACGGGGCATTTCGCTACGTAGGGAGCGAGCGCAAGACGCGATACACGGTCGCGCTT 30216 |||| || || |||||| || | || | ||||| ||||| || ||||| Sbjct 554 GTCGATGGCCGCTTCAACTACGTCGGCTCGGCGCTGACCACGCGCTACACCGTGGCGCTG 495 Query 30217 GTCAGCTACAACGATCCAT---CGAACCAGTACAAACAGGCGGTCGAGTACGTGCCGGAC 30273 || || ||||| ||| |||| | | ||| |||||||||||| | || Sbjct 494 GTGTCCTGGAACGA--CATGTCCGAAATGGGTC-GCCAGAAGGTCGAGTACGTCGAGAAC 438 Query 30274 GACGACGGTATTGCGCGTTACGGCGTCATCAAGACGCAGGTAACGGCGTTCGGTTGCACG 30333 ||| || || ||||| || || || || | | || || | |||||| ||||| Sbjct 437 CGCGAAGGCATCGCGCGCTATGGAATCCAGCAGGTGGAAGTGACCGGGTTCGGCTGCACC 378 Query 30334 TCGCAGGNNNNNNNNNNCCGGCTCGGGCGATGGCTTCTCCTGACGTCGCGCTACGAGTCG 30393 |||| | |||| |||| ||| | || ||||| || | ||| || Sbjct 377 TCGCGCGGCCAGGCGCACCGGATCGGCAAGTGGATGCTGCTGACCTCCAACCTGGAGACG 318 Query 30394 GGCACGGTGTCGTTCAAGGTCGGGATGGATGGCGTGCTG-GTCGGCCCGGGCCAGGTGAT 30452 || |||| ||||| |||||| ||||| || ||| | || | |||||| ||||| Sbjct 317 CGCTCGGTCACGTTCTCGGTCGGCCTGGAT-GCCTGCCGCGTGCGGCCGGGCAGCGTGAT 259 Query 30453 -CGCGATCGCCGATCCGCGAAAGGCTGGTCGACGCATCGGCGGGCGCATTCG 30503 |||| | ||||| | || ||| || || ||||||||||| ||||| || Sbjct 258 CCGCG-TGGCCGACCAGCACCTGGCGGGCCGCCGCATCGGCGGCCGCATCCG 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127463629631520