Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=778493 Score = 100 bits (110), Expect = 3e-16 Identities = 135/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 |||| || | | ||| |||||||| |||||| || ||| ||||| ||||||| || | Sbjct 567013 CCTCATCCCTGCTGATAAGTTCATTAGAGAAGGTCAAACCAGGCATCAGACCCCTTTTTT 566954 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 ||||||||||||| | | ||| ||||||||||| |||||||| || ||| ||||| | Sbjct 566953 TCAACCAGAAAATTGAAGCAAACGAGCCAGAGAAAAAGATCCCTTCAACAGCAGCGAATG 566894 Query 127659 CAAATAGACGCTCGGCAAAGGAGCGGGACTTT--GTATCAAACCACTTCATCGCCCACTG 127716 | | | || || || || | || | | | | || | ||| |||| |||||||| Sbjct 566893 CCACAACCCGTTCACCATAG--GTGGCATTGTCAGCATTGATCCAGTTCAATGCCCACTG 566836 Query 127717 TGCCTT 127722 |||||| Sbjct 566835 TGCCTT 566830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613092162379200