Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_015225.1 Length=35499 Score E Sequences producing significant alignments: (Bits) Value seq7310 545 5e-151 >seq7310 Length=770 Score = 545 bits (604), Expect = 5e-151 Identities = 476/589 (81%), Gaps = 7/589 (1%) Strand=Plus/Plus Query 11062 AGTTTCAACAACCACGTGCGCACGCTGGTGGCGCGCGAGGAGGTGGCCATCGGGCTGATG 11121 || || | |||||||||||||||||| ||||| |||||||||||||| || | |||||| Sbjct 107 AGCTTTACCAACCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATG 166 Query 11122 CACCTGTGGGACTTTGTGGAGGCGTTCGTGCACAACCCGAGCAGCAAGGCGCTGACGGCG 11181 || |||||||||||||| ||| | | ||| ||||| | |||||| |||| | |||| Sbjct 167 CATCTGTGGGACTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCG 226 Query 11182 CAGCTGTTCCTAATCGTGCAGCACAGCCGCGACAACGAGCTGTTTCGCGACGCGCTGCTG 11241 ||||||||||| || |||||||||| | | ||||||||| || | || |||||||| Sbjct 227 CAGCTGTTCCTTATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTA 286 Query 11242 AACATCGCCGAGCCCGAGGGCCGGTGGCTGCTGGACCTGATTAACATCCTGCAGAGCATC 11301 ||||| | |||||||||||||| |||||||| || |||| ||||| ||||||||||| Sbjct 287 AACATAGTAGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATA 346 Query 11302 GTGGTGCAGGAGCGCTCGCTCAGCCTGGCCGACAAGGTGGCGGCCATCAACTACTCGATG 11361 ||||||||||||||| | |||||||| ||||||||||| ||||| ||||| || ||| Sbjct 347 GTGGTGCAGGAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATG 406 Query 11362 CTGAGCCTGGGCAAGTTTTACGCGCGCAAAATCTACCGCAGCCCCTACGTGCCCATCGAC 11421 || || ||||||||||||||||| ||||| || |||| | ||| ||||| ||||| ||| Sbjct 407 CTCAGTCTGGGCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGAC 466 Query 11422 AAGGAGGTGAAGATCGATAGCTTTTACATGCGGATGGCCCTGAAGGTGCTGACGCTGAGC 11481 |||||||| |||||||| | || |||||||| ||||| |||||||||| || ||||| Sbjct 467 AAGGAGGTAAAGATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGC 526 Query 11482 GACGACCTGGGCGTGTACCGCAACGACCGCATCCAC-AAGGCGGTCAGCGCCAGCCGGCG 11540 ||||||||| |||| || |||||||| ||||||||| ||||| || |||| |||||||| Sbjct 527 GACGACCTGAGCGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCG 586 Query 11541 GCGCGAGCTGAGCGACCGCGAGCTGCTGCACAGCCTGCGCCGGGC----GCTGGCGGGGG 11596 ||||||||| ||||||||||||||| |||||||||||| |||| |||||| ||| Sbjct 587 GCGCGAGCTCAGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGG 646 Query 11597 C--GGGGGACCCGGAGCGCGAGGCCTACTTCGAGGCGGGCGCGGACCTG 11643 | || || ||| |||| ||||||| || |||||||| |||||| Sbjct 647 CAGCGGCGATAGAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTG 695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113402272325840