Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq53636 111 2e-19 >seq53636 Length=245099 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 154924 AGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAA 154983 |||| || |||| |||| || ||||||||| || ||||| ||||| || ||| | | Sbjct 53080 AGATGTGCGAGATGATTCACGATGCTGGTGGTCAAGTCTATCTCGATGGTGCGAATATGA 53021 Query 154984 ATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACT 155043 ||||||| || || || ||| |||| || ||| | ||||| | ||||| || | Sbjct 53020 ATGCACAAGTGGGTCTCTGTCGACCGGGTGATTACGGTTCTGATGTCTTGCATCTTAATT 52961 Query 155044 TACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTG 155103 |||||||||||||||||||||| || || ||||| || || || | || || ||||| | Sbjct 52960 TACATAAAACATTCTGTATTCCTCACGGTGGTGGTGGACCAGGAATGGGACCCATAGGAG 52901 Query 155104 T 155104 | Sbjct 52900 T 52900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578820962540800