Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq29267 84.2 5e-11 >seq29267 Length=189138 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || |||||||| ||||| || || || || || ||||| |||||||| ||| Sbjct 14495 CCATCTTCCAGTTGCTTACCAGCGAAAATGAGACGCTGCTGATCTGGTGGAATGCCCTCT 14554 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083 ||||| || || || || || || ||||||||||| || Sbjct 14555 TTGTCCTGGATCTTAGCTTTCACATTTTCAATGGTGTCTGA 14595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108712271590040