Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_015932.1 Length=31616 Score E Sequences producing significant alignments: (Bits) Value seq7310 140 7e-29 >seq7310 Length=770 Score = 140 bits (154), Expect = 7e-29 Identities = 374/565 (66%), Gaps = 10/565 (2%) Strand=Plus/Plus Query 10121 GGTGACGGCCTATGAGCAGACAGTGAAGGAGGAGGTGAACTTTC--AAACCTCCTTTAAC 10178 ||| || || || || || || ||||| ||||| | ||||||| ||| || ||| | Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCT---TTACC 115 Query 10179 AATAACGTGCGCACTCTCATTGCCAGAGAGGAAGTTGTTATTGGCCTAATGCACCTCTGG 10238 || |||||||||| || | || | ||||| || | ||| | || ||||| || ||| Sbjct 116 AACCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGG 175 Query 10239 GACTTTGTCCAGTCATTCCT-AG-AAAACCCCCTGAGCAAGGCCCTCACCGCCCAGCTTT 10296 |||||||| | || | || ||||||| |||||| | |||| || ||||| | Sbjct 176 GACTTTGT--AATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGT 233 Query 10297 TCCTTATTGTGCAACACTGCCGGGATGAGGGAGTGCTGCGGGAGAGCCTGCTGAATATCG 10356 ||||||| ||||| ||| | |||| | | | | |||| ||||| || || | Sbjct 234 TCCTTATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAG 293 Query 10357 CCCAGCCCGAAAGCCGCTGGCTGATAGATCTGCTTAACCTCTTGCAAACTATTGTAGTGC 10416 ||||||| ||||||||||| | ||| || | ||| | |||| | || || |||| Sbjct 294 TAGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGC 353 Query 10417 AGGAGCGGGGGCTGGCCCTGGGGGAGAAGGTGGCAGCCATCAATTATTCTATCATTACTC 10476 ||||||| | || ||||| || |||||||| ||||| || ||||| || | | || Sbjct 354 AGGAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTC 413 Query 10477 TAAGCAAACACTATGCTAGAAAGATCTTCAACTCGGTCTTTGTTCCCATCGACAAGGAAG 10536 | |||| || || | ||||| | | | | | |||||||| |||||||| | Sbjct 414 TGGGCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGG 473 Query 10537 CCAAGATAAACACTTTTTATATGAGGACGGTTATCAAGGTGCTGGTGCTAAGTGATGATC 10596 ||||| | || || ||| | | || | |||||||| | || || || | Sbjct 474 TAAAGATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACC 533 Query 10597 TGGGAATGTACCGCAATGAAAGAATAGA-GAGGGCCGTGTCCGGCGCCCGGCAGCGGGAG 10655 || | | || ||||| || | || | | ||||||| || ||||| ||| ||| Sbjct 534 TGAGCGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAG 593 Query 10656 TACAACGACAGGGAGCTCATGTACA 10680 || |||| | ||||| ||| ||| Sbjct 594 CTCAGCGACCGCGAGCTGATGCACA 618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100984657948320