Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq40219 269 2e-66 seq23573 264 9e-65 seq6224 257 1e-62 seq15824 127 2e-23 seq24760 107 2e-17 seq14329 86.0 5e-11 >seq40219 Length=5090 Score = 269 bits (298), Expect = 2e-66 Identities = 556/814 (68%), Gaps = 26/814 (3%) Strand=Plus/Plus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT-ATCATGGTGTGTTG 551847 ||| ||| ||||||||||||| |||||||| |||| ||||||||| | | ||| || Sbjct 1034 TGGTGATACTCATCTTGGTGGGGAAGATTTCGATAGTAGACTGGTGAACCACCTGT-TTC 1092 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTC-TTCGTC-- 551904 |||| |||||| |||| |||| || ||| ||| | || || | ||| | Sbjct 1093 AAGAATTTAAAAGAAAGCACAAGAAAGAC--ATC-ACA---GGAAATGCACGTTCATTAA 1146 Query 551905 ---GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCA 551961 | || |||||||| || ||||| ||| || | | || |||| ||||| Sbjct 1147 GAAGACTGAGAACTGCAGCAGAGAGAGCTAAAAGAACCTTATCCAACAGTACACAAACAT 1206 Query 551962 CTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCA 552021 | ||||| |||||||| | ||||| || ||||| | | |||| ||| | | || | Sbjct 1207 CCATTGAGATAGATTCACTGTTTGAAGGTATTGACTTTTATACTAGTATCACACGTGCTA 1266 Query 552022 AATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT 552081 ||||||||| |||| |||||||| ||| | ||| | | ||||| || ||| | Sbjct 1267 GATTTGAAGAGCTTTGCTCTGATCTATTTCGTGCAACGTTAAATCCAGTGGAGAAAGCAT 1326 Query 552082 TAAGAGATTCAAAGATTG--ATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATC 552139 | ||| | || ||| | ||||| || | |||| || || | ||||||||||| Sbjct 1327 TGCTTGATGCCAAACTTGCCAAAAATCAAA--TCGATGAGATCGTATTAGTTGGTGGATC 1384 Query 552140 TACAAGAATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAA 552198 |||||||||||| ||| | | | || | || ||| ||||||||| |||| | | | Sbjct 1385 TACAAGAATTCCAAAAGTACAGCAGTTGCTGCAGAACTT-TTTCAATGGGAAAACACTGA 1443 Query 552199 ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 | || | | ||||| ||||| ||||| || |||||||| ||| | ||||| || || Sbjct 1444 ACAAATCTATCAATCCTGATGAAGCTGTAGCATATGGTGCTGCAGTACAAGCTGCAATCT 1503 Query 552259 TTTCTGGA---CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTC 552315 | ||||| ||| |||||||| | || || | || | || |||||| |||| Sbjct 1504 TATCTGGTGACCAATCTGATGAAG---TGAAAGATGTACTATTGGTTGATGTTGCTCCGT 1560 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 |||| |||||| | ||||| | ||| || | |||||||| || || ||| | || || Sbjct 1561 TATCCCTTGGTATTGAAACTGCTGGTGGCGTGATGACTAACCTGATTGATCGCAACACCC 1620 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 || || | |||| || |||| | || ||| |||| |||||| | ||||||| Sbjct 1621 GCATCCCATCAAAAATGTCAAAAACATTTACAACATATGCAGACAATCAACCAGCTGTTA 1680 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 | ||||| | |||||||||||| | | | || ||||| ||||||| || || | Sbjct 1681 CCATTCAGGTCTTTGAAGGAGAACGTGCAATGACAAAAGACAATAATCGTCTGGGATTAT 1740 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 | | ||| || || || || ||||| ||||| || || | |||||||| || || | Sbjct 1741 TCGAGTTATCTGGGATCCCACCAGCTCCACGTGGTGTTCCCAAGATTGAAGTGACATTTG 1800 Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||| ||||| ||||| |||||||| || ||||| Sbjct 1801 ATATTGATGCAAATGGCATTTTGAACGTTACTGC 1834 Score = 181 bits (200), Expect = 9e-40 Identities = 378/553 (68%), Gaps = 14/553 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| || | || || || || |||||||| || | ||| | || || Sbjct 380 AGCTATTGGTATCGACCTGGGGACAACTTACTCATGTGTTGGAGTATTTCAACACGGCAA 439 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| || ||||| || |||||||||||||| || || ||||||| | || || Sbjct 440 AGTAGAAATCATCGCCAACGACCAAGGTAACAGAACAACACCTAGTTATGTTGCCTTTAC 499 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTA 550166 || ||||| | | ||| | || |||||||| || || | ||| || ||||| | Sbjct 500 TGACACTGAGAGACTTA-TCGGCGATGCAGCCAAGGGACAGGTTGCCA-TG--AATCCGA 555 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 || | | || || ||||| ||| | || ||| | | ||| | || | |||| | Sbjct 556 AGAACTCAGTCTTCGACGCTAAGCGTCTTATCGGACGGAAATTTGACGACACATCTGTGC 615 Query 550227 AGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTG 550286 || |||| ||||||| |||||||| ||| || || | ||| ||||| | | || Sbjct 616 AGTCAGACATGAAGCTGTGGCCTTTTCAAGTTTACAACGACAGTGGGAAACCCAA-AGTG 674 Query 550287 A-AGCTAC--TCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGG 550343 | ||| ||| |||| | ||| |||| |||| ||| |||| ||||||| Sbjct 675 AGAGCCGAGTTCA--AAGGCGAAATCAAATCATTTACACCTGAAGAAATCAGCTCTATGG 732 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | | || |||| | | ||||| || | | | || ||| || | ||||| | Sbjct 733 TCCTGACAAAGATGAGAGAGACAGCTGAAGCGTATCTGGGGCAAACGGTCAAAGATGCGG 792 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || |||||||| || || || || ||||| || | ||||| || ||||||||||| Sbjct 793 TCATTACTGTACCTGCTTACTTCAACGACTCCCAGAGACAAGCAACCAAAGATGCTGGCT 852 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||| || || || ||||| || || ||||||||||| || || ||||| | |||| Sbjct 853 TTATTGCCGGTCTCAACGTTCTACGAATCATCAATGAACCCACAGCAGCTGCTTTGGCAT 912 Query 550524 ATGGACTTGATAA 550536 | ||||| ||||| Sbjct 913 ACGGACTGGATAA 925 >seq23573 Length=4089 Score = 264 bits (292), Expect = 9e-65 Identities = 587/868 (68%), Gaps = 26/868 (3%) Strand=Plus/Minus Query 551735 TGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGA 551794 |||||| || | || || | |||||||| | ||| || | | ||| ||| || Sbjct 1607 TGACGTCTCTATCCTGACTATTGAAGATGGCATATTTGAAGTGAAATCAACTGCTGGTGA 1548 Query 551795 TTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT-ATCATGGTGTGTTGAAGATT 551853 | ||||||||||||| |||||||| |||| ||||||||| | | || ||| |||| | Sbjct 1547 TACTCATCTTGGTGGGGAAGATTTCGATAGTAGACTGGTGAACCACCTG-GTTCAAGAAT 1489 Query 551854 TTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTC-TTCGTC-----GTC 551907 ||||| |||| |||| || ||| ||| | || || | ||| | | | Sbjct 1488 TTAAAAGAAAGCACAAGAAAGAC--ATC-ACA---GGAAATGCACGTTCATTAAGAAGAC 1435 Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967 | |||||||| || ||||| ||| || | | || |||| ||| | | |||| Sbjct 1434 TGAGAACTGCAGCAGAGAGAGCTAAAAGAACCTTATCCAACAGTACACAAGCATCCATTG 1375 Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTG 552027 | |||||||| | ||||| || ||||| | | |||| ||| | | || | ||||| Sbjct 1374 AGATAGATTCACTGTTTGAAGGTATTGACTTTTATACTAGTATCACACGTGCTAGATTTG 1315 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 |||| |||| |||||||| ||| | ||| | ||||||| || ||| || | Sbjct 1314 AAGAGCTTTGCTCTGATCTATTTCGTGCAACGTTACAACCAGTGGAGAAAGCATTGCTTG 1255 Query 552088 ATTCAAAGATTG--ATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 || | || ||| | ||||| || | |||| || || | ||||||||||||||||| Sbjct 1254 ATGCCAAACTTGCCAAAAATCAAA--TCGATGAGATCGTATTAGTTGGTGGATCTACAAG 1197 Query 552146 AATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 |||||| ||| | | | || | || ||| ||||||||| |||| | | || || Sbjct 1196 AATTCCAAAAGTGCAACAGTTGCTGCAGAACTT-TTTCAATGGGAAAACACTGAACAAAT 1138 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | | ||||| ||||| ||||| || |||||||| ||| | ||||| || || | |||| Sbjct 1137 CTATCAATCCTGATGAAGCTGTAGCATATGGTGCTGCAGTACAAGCTGCAATCTTATCTG 1078 Query 552265 GA---CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 | ||| |||||||| | || || | || | || |||||| |||| |||| | Sbjct 1077 GTGACCAATCTGATGAAG---TGAAAGATGTACTATTGGTTGATGTTGCTCCGTTATCCC 1021 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 ||||| | ||||| | ||| || | |||||||| || || ||| | || || || | Sbjct 1020 TTGGTATTGAAACTGCTGGTGGCGTGATGACTAACCTGATTGATCGCAACACCCGCATCC 961 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | | |||| || |||| | || ||| |||| || ||| | |||||||| |||| Sbjct 960 CATCAAAAATGTCAAAAACATTTACAACATATGCAGACAACCAACCAGCTGTTACCATTC 901 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATT 552501 | | |||||||||||| | | | || ||||| ||||||| || || || | | Sbjct 900 AGGTCTTTGAAGGAGAACGTGCAATGACAAAAGACAATAATCGTCTGGGATTATTCGAGT 841 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 || || || || || ||||| ||||| || || | ||||||| || || ||||| | Sbjct 840 TATCTGGGATCCCACCAGCTCCACGTGGTGTTCCCAAGGTTGAAGTGACATTTGATATTG 781 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGC 552589 |||| ||||| |||||||| || ||||| Sbjct 780 ATGCAAATGGCATTTTGAACGTTACTGC 753 Score = 194 bits (214), Expect = 1e-43 Identities = 381/553 (69%), Gaps = 14/553 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| || | || || || || |||||||| || | ||| | || || Sbjct 2207 AGCTATTGGTATCGACCTGGGGACAACTTACTCGTGTGTTGGAGTATTTCAACACGGCAA 2148 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| || ||||| || |||||||||||||| || || ||||||| | || || Sbjct 2147 AGTAGAAATCATCGCCAACGACCAAGGTAACAGAACAACACCTAGTTATGTTGCCTTTAC 2088 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTA 550166 || ||||| | | ||| | || |||||||| || || | ||| || ||||| | Sbjct 2087 TGACACTGAGAGACTTA-TCGGCGATGCAGCCAAGGGACAGGTTGCCA-TG--AATCCGA 2032 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 || | | || ||||| || ||| | || ||| | || ||| | || | |||| | Sbjct 2031 AAAACTCGGTCTTCGATGCCAAGCGTCTTATCGGACGGAGATTTGACGACACATCTGTGC 1972 Query 550227 AGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTG 550286 || |||| ||||||| |||||||||||| || || | ||| ||||| | | || Sbjct 1971 AGTCAGACATGAAGCTATGGCCTTTCCAAGTTTACAACGACAGTGGGAAACCCAA-AGTG 1913 Query 550287 A-AGCTAC--TCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGG 550343 | ||| ||| |||| | ||| |||| |||| ||| |||| ||||||| Sbjct 1912 AGAGCCGAGTTCA--AAGGCGAAATCAAATCATTTACACCTGAAGAAATCAGCTCTATGG 1855 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | | || |||| | | |||||| || | | | || ||| || | ||||| | Sbjct 1854 TCCTGACAAAGATGAGAGAGACAGCCGAAGCGTATCTGGGGCAAACGGTCAAAGATGCTG 1795 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || |||||||| || || || || ||||| || | ||||| || ||||||||||| Sbjct 1794 TCATTACTGTACCTGCTTACTTCAACGACTCCCAGAGACAAGCAACCAAAGATGCTGGCT 1735 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||| || || || ||||| || || ||||||||||| || || ||||| | |||| Sbjct 1734 TTATTGCCGGTCTCAACGTTCTACGAATCATCAATGAACCCACAGCAGCTGCTTTGGCAT 1675 Query 550524 ATGGACTTGATAA 550536 | ||||| ||||| Sbjct 1674 ACGGACTGGATAA 1662 >seq6224 Length=2297 Score = 257 bits (284), Expect = 1e-62 Identities = 553/814 (68%), Gaps = 26/814 (3%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT-ATCATGGTGTGTTG 551847 ||| ||| ||||||||||||| |||||||| |||| ||||||||| | | || ||| Sbjct 1360 TGGTGATACTCATCTTGGTGGAGAAGATTTCGATAGTAGACTGGTGAACCACCTG-GTTC 1302 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTC-TTCGTC-- 551904 |||| |||||| |||| |||| || ||| ||| | || || | ||| | Sbjct 1301 AAGAATTTAAAAGAAAGCACAAGAAAGAC--ATC-ACA---GGAAATGCACGTTCATTAA 1248 Query 551905 ---GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCA 551961 | ||||||||||| || || || ||| || | | || |||| ||| | Sbjct 1247 GAAGACTAAGAACTGCAGCAGAGAGGGCTAAAAGAACCTTATCCAACAGTACACAAGCAT 1188 Query 551962 CTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCA 552021 | ||||| ||||||||| | ||||| || ||||| | | |||| ||| | | || | Sbjct 1187 CCATTGAGGTAGATTCACTGTTTGAAGGTATTGACTTTTATACTAGTATCACACGTGCTA 1128 Query 552022 AATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT 552081 ||||||||| |||| ||||||| ||| | ||| | ||||||| || ||| | Sbjct 1127 GATTTGAAGAGCTTTGCGCTGATCTATTTCGTGCAACGTTACAACCAGTGGAGAAAGCAT 1068 Query 552082 TAAGAGATTCAAAGATTG--ATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATC 552139 | ||| | || ||| | ||||| || | |||| || || | ||||||||||| Sbjct 1067 TGCTTGATGCCAAACTTGCCAAAAATCAAA--TCGATGAGATCGTATTAGTTGGTGGATC 1010 Query 552140 TACAAGAATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAA 552198 |||||||||||| ||| | | | || | || ||| ||||| ||| |||| | | | Sbjct 1009 TACAAGAATTCCAAAAGTACAGCAGTTGCTGCAGAACTT-TTTCAGTGGGAAAACACTGA 951 Query 552199 ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 | || | | ||||| ||||| ||||| || |||||||| ||| | ||||| || || Sbjct 950 ACAAATCTATCAATCCTGATGAAGCTGTAGCATATGGTGCTGCAGTACAAGCTGCAATCT 891 Query 552259 TTTCTGGA---CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTC 552315 | ||||| ||| | |||||| | || || | || | || |||||| |||| Sbjct 890 TATCTGGTGACCAATCGGATGAAG---TGAAAGATGTGCTATTGGTTGATGTTGCTCCGT 834 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 |||| ||||| | ||||| | ||| || || |||||||| || || ||| | || || Sbjct 833 TATCCCTTGGCATTGAAACTGCTGGTGGCATGATGACTAACCTGATTGATCGCAACACCC 774 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 || || | |||| || |||| | || ||| |||| |||||| | ||||||| Sbjct 773 GCATCCCATCAAAAATGTCAAAAACATTTACAACATATGCAGACAATCAACCAGCTGTTA 714 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 | ||||| | |||||||||||| | | | || ||||| ||||||| || || | Sbjct 713 CCATTCAGGTCTTTGAAGGAGAACGTGCAATGACAAAAGACAATAATCGTCTGGGATTAT 654 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 | | ||| || || || || ||||| ||||| || || | |||||||| || || | Sbjct 653 TCGAGTTATCTGGGATCCCACCAGCTCCACGTGGTGTTCCCAAGATTGAAGTCACATTTG 594 Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||| ||||| || || |||||||| || ||||| Sbjct 593 ATATTGATGCAAACGGTATTTTGAACGTTACTGC 560 Score = 208 bits (230), Expect = 6e-48 Identities = 384/553 (69%), Gaps = 14/553 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| || | || || || || |||||||| || | ||| | || || Sbjct 2014 AGCTATTGGTATCGACCTGGGGACAACTTACTCGTGTGTTGGAGTATTTCAACACGGCAA 1955 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| || ||||| || |||||||||||||| || || ||||||| | || || Sbjct 1954 AGTAGAAATCATCGCCAACGACCAAGGTAACAGAACAACACCTAGTTATGTTGCCTTTAC 1895 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTA 550166 || ||||| | | ||| | ||||||||||| || || | ||| || ||||| | Sbjct 1894 TGACACTGAGAGACTTA-TCGGTGATGCAGCCAAGGGACAGGTTGCCA-TG--AATCCGA 1839 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 || | | || || ||||| ||| | || ||| | || ||| | || | |||| | Sbjct 1838 AAAACTCAGTCTTCGACGCTAAGCGTCTTATCGGACGGAGATTTGACGACACATCTGTGC 1779 Query 550227 AGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTG 550286 || |||| ||||||| |||||||| ||| || || | ||||||||| | | || Sbjct 1778 AGTCAGACATGAAGCTGTGGCCTTTTCAAGTTTACAACGACAGTGGAAAACCCAA-AGTG 1720 Query 550287 AAG--CTACT-CATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGG 550343 | | | | | || |||| ||||| |||| |||| ||| |||| ||||||| Sbjct 1719 AGGGCCGAGTTCA--AAGGCGAAATTAAATCATTTACACCCGAAGAAATCAGCTCTATGG 1662 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | | || |||| | | ||||| || | | | || ||| || | ||||| | Sbjct 1661 TCCTGACAAAGATGAGAGAGACAGCTGAAGCGTATCTGGGGCAAACGGTCAAAGATGCGG 1602 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || |||||||| || || || |||||||| || | ||||| || ||||||||||| Sbjct 1601 TCATTACTGTACCTGCTTACTTCAATGACTCCCAGAGACAAGCAACCAAAGATGCTGGCT 1542 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||| || || || ||||| || || ||||||||||| || || ||||| | |||| Sbjct 1541 TTATTGCCGGTCTCAACGTTCTACGAATCATCAATGAACCCACAGCAGCTGCTTTGGCAT 1482 Query 550524 ATGGACTTGATAA 550536 ||||||| ||||| Sbjct 1481 ATGGACTAGATAA 1469 >seq15824 Length=587563 Score = 127 bits (140), Expect = 2e-23 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || ||||||| || || ||||||||||| || ||||||||||| || ||||||| Sbjct 112398 ATGCTGTTGTAACTGTTCCTGCCTATTTTAATGATTCCCAACGTCAAGCAACCAAAGATG 112339 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || ||| | ||| | ||||| |||||||| ||||||||||||||||| || || Sbjct 112338 CCGGTACCATTTCCGGAATGAATGTACTTCGTATAATCAATGAACCTACTGCCGCAGCCA 112279 Query 550518 TTGCATATGGACTTGATAAA 550537 | |||||||| ||||| ||| Sbjct 112278 TAGCATATGGTCTTGACAAA 112259 Score = 87.8 bits (96), Expect = 1e-11 Identities = 134/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||||| || || |||||| ||||| ||||| | || |||| ||||||||| Sbjct 113327 GGCATTGATTTGGGCACAACATATTCGTGTGTGGGTGTCTTCCAGCATGGGAAAGTTGAA 113268 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 ||||||||||| || ||||| || | || || || ||||| | || || || || Sbjct 113267 ATTATTGCCAACGACCAAGGAAATCGTACAACACCCAGCTATGTAGCATTTACAGACACC 113208 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 |||| | | | |||||||| || || |||||| || || ||||| | |||||| Sbjct 113207 GAACGTCTCATCGGTGATGCGGCCAAGAATCAAGTTGCAATG--AATCCAATAAATACTG 113150 Query 550176 TTTTTGATG 550184 | |||| || Sbjct 113149 TATTTGGTG 113141 >seq24760 Length=292924 Score = 107 bits (118), Expect = 2e-17 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 ||||||||| |||| || |||| | ||||| || | | | |||| ||| | ||| Sbjct 33911 AAAATGAAAGAAACTGCTGAGGCTTATCTTGGTAAATCTATCAAGAATGCTGTAGTGACT 33852 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 ||||| ||||| || ||||| | |||||||||||||| ||||||||||| ||||||| Sbjct 33851 GTACCTGCATACTTCAATGATGCTCAACGTCAAGCTACCAAAGATGCTGGTGTTATTGCT 33792 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACC 550503 || || ||||| | | || ||||||||||| Sbjct 33791 GGTCTCAATGTCATGAGAATAATCAATGAACC 33760 >seq14329 Length=486688 Score = 86.0 bits (94), Expect = 5e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| ||||| | ||| | ||| |||||| ||||||||||||| || || | | Sbjct 199969 AGACGAAGTACTAAATGTAAGGTTGATTCTTTCTGGATATTGTAATCAGATAACGTACGT 199910 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 ||||||||||||||| |||||||| || | || ||||| || || ||||||||| Sbjct 199909 CCATCTTCAAGTTGTTTACCGGCAAAGATCAACCTCTGCTGGTCGGGTGGAATTCCT 199853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026433890318800