Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_017825.1 Length=36711 Score E Sequences producing significant alignments: (Bits) Value seq7310 495 9e-136 >seq7310 Length=770 Score = 495 bits (548), Expect = 9e-136 Identities = 518/676 (77%), Gaps = 11/676 (2%) Strand=Plus/Plus Query 11285 GGTCACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAA 11344 ||| || |||||||| || || ||||| |||||| ||||| | ||| | || | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCTTT-ACCAA 117 Query 11345 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGA 11404 |||||||||||| || | || |||||||||||| | | | |||||||| |||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11405 CCTGCTGGAGGCCATCGTGCAGAACCCCACCAGCAAGCCGCTGACGGCGCAGCTGTTCCT 11464 | | | || | | ||| ||||| | ||||||||||| | ||||||||||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11465 GGTGGTGCAGCATAGTCGGGACAACGAGGCGTTCAGGGAGGCGCTGCTGAATATCACCGA 11524 | |||||||| | ||||||||||||| |||||||| |||||||| || || || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11525 GCCCGAGGGCCGCTGGCTCCTGGACCTGGTGAACATTCTGCAGAGCATCGTGGTGCAGGA 11584 |||||||||||||||||| || || || | ||||||||||||||||| ||||||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11585 GCGCGGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTCTCGGTGCTGAGTCTGGG 11644 |||| | || ||| | || ||| |||| ||||| |||| || |||| |||||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11645 CAAGTACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGAA 11704 ||||| ||||| | ||||| ||| | ||||| ||||| ||||||||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11705 GATCGACGGGTTTTACATGCGCATGACCCTGAAAGTGCTGACCCTGAGCGACGATCTGGG 11764 |||||| ||||| |||||||||||| | |||| ||||| ||| |||||||||| ||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11765 GGTGTACCGCAACGACAGGATGCAC-CGCGCGGTGAGCGCCAGCAGGCGGCGCGAGCTGA 11823 || || |||||||| | || ||| || ||||||| ||| ||||||||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11824 GCGACCAGGAGCTGATGCACAGCCTGCAGCGGGCCCTGAC-----CGGG--GCCGGGACC 11876 |||||| |||||||||||||||||||| |||||||| | |||| || | || Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 11877 GAGGGG--GAGAGCTACTTTGACATGGGCGCGGACCTGCACTGGCAGCCCAGCCGCCGGG 11934 ||| || ||| |||||||||| |||||| ||||||| |||| || |||| || | Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 11935 CCTTGGAGGCGGCAGG 11950 || || | || || || Sbjct 718 CCCTGTAAGCAGCTGG 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117278179775120