Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 4e-11 >seq1 Length=778493 Score = 84.2 bits (92), Expect = 4e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || |||| |||||| || | || |||||| | ||||||||| | ||||| | ||| Sbjct 567011 TCATCCCTGCTGATAAGTTCATTAGAGAAGGTCAAACCAGGCATCAGACCCCTTTTTTTC 566952 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 | ||||||||||| || || ||||||||||| ||||| || || || || ||||| || Sbjct 566951 AACCAGAAAATTGAAGCAAACGAGCCAGAGAAAAAGATCCCTTCAACAGCAGCGAATGC 566893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930902618060800