Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq51641 95.1 2e-14 seq1 95.1 2e-14 >seq51641 Length=269637 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 || || || || |||||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct 56573 AATCCATTTGATTTTATGGAAAACATATCGCTGGAAGGAAAGACCAACTTCTTTGAGAAG 56632 Query 26305 AGGGTCGGCGACTATCA 26321 || ||||| || ||||| Sbjct 56633 AGAGTCGGGGAGTATCA 56649 >seq1 Length=778493 Score = 95.1 bits (104), Expect = 2e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAG 25878 || |||||||| | |||||| |||| |||||||| | | || || | ||| || Sbjct 566824 AAAAGGAAGGCACAGTGGGCATTGAACTGGATCAATGCTGACAATGCCACCTATGGTGAA 566883 Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 ||| | || || || |||||||| || || ||||||||| || |||||||| | || Sbjct 566884 CGGGTTGTGGCATTCGCTGCTGTTGAAGGGATCTTTTTCTCTGGCTCGTTTGCTTCAATT 566943 Query 25939 TTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAG 25997 |||||| | || | |||||| | ||||| || || ||| || || || || ||||| Sbjct 566944 TTCTGGTTGAAAAA-AAGGGGTCTGATGCCTGGTTTGACCTTCTCTAATGAACTTATCAG 567002 Query 25998 CAGGGACGAGG 26008 |||||| |||| Sbjct 567003 CAGGGATGAGG 567013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928216436492800