Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_020485.1 Length=34302 Score E Sequences producing significant alignments: (Bits) Value seq7310 302 1e-77 >seq7310 Length=770 Score = 302 bits (334), Expect = 1e-77 Identities = 448/631 (71%), Gaps = 8/631 (1%) Strand=Plus/Plus Query 10874 CGCTTATGAGCAGACAGTAAAAGAGGAAATGAACTTTCAGAAAAGCTTTAATCATCACGT 10933 ||| || || || || || || |||| || ||||||| |||| |||||| | ||||| Sbjct 65 CGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAA-GCTTTACCAACCACGT 123 Query 10934 GCGAACACTTATTGCGCGTGAAGAGGTAGCAATTGGTCTTATGCATTTGTGGGACTTTGT 10993 ||| || ||| | || || || ||||| || || | || |||||| ||||||||||||| Sbjct 124 GCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTTGT 183 Query 10994 GGAGGCCTATGTTCAAAATCCCAGCAGCAAGCCGTTAACAGCACAACTTTTTCTTATTGT 11053 || | ||||| || | ||||||||| | | || || || || ||||| || Sbjct 184 AATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAGT 243 Query 11054 TCAGCACAGTAGAGATAATGAAACTTTTAGGGAAGCCATGCTAAACATTGCAGAACCGGA 11113 ||||||| || || || || | || ||||| || |||||||||| | ||| || || Sbjct 244 GCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCGA 303 Query 11114 GGGCCGTTGGCTTCTTGACTTAATTAACATTTTGCAAAGCATTGTAGTACAAGAGCGCTC 11173 |||||| ||||| || || || || |||||| |||| ||||| || || || |||||| Sbjct 304 GGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCAG 363 Query 11174 CCTAAGTTTGTCAGACAAAGTTGCCGCTATTAACTACAGCATGTTGTCTTTGGGCAAATT 11233 | | || || | ||||| || ||||| |||||||| |||| | | ||||||| || Sbjct 364 CTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGTT 423 Query 11234 TTATGCGCGAAAAATTTACAAGTCGCCATTTGTGCCTATTGACAAGGAGGTAAAAATTGA 11293 ||| || || || || ||| | | || | || || || |||||||||||||| || || Sbjct 424 TTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGATCGA 483 Query 11294 TAGTTTTTACATGCGCATGGCCCTAAAGGTGCTGACGCTTAGTGATGACCTTGGCGTGTA 11353 | || |||||||||||||| | |||||||| || | || || ||||| |||| || Sbjct 484 GGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCGTTTA 543 Query 11354 TCGAAACGATCGTATTCAC-AAGGCTGTAAGTGCCAGCCGCCGAAGAGAGCTAAGCGATA 11412 ||| ||||| || || ||| ||||| || || | ||||| || | ||||| ||||| Sbjct 544 TCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGACC 603 Query 11413 GGGAGTTGCTTCATAGCTTACATCGGGCTTTAACCGGGACTGGAAGCGCAGA---AGCGT 11469 | ||| || | || ||| | || |||| | | || || || |||| || || | Sbjct 604 GCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATAGAGAGG 663 Query 11470 CAGA---CTATTTTGACGCCGGAGCTGACCT 11497 | || ||| |||||||| || |||||||| Sbjct 664 CCGAGTCCTACTTTGACGCGGGCGCTGACCT 694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109574334028160