Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_020487.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq7310 526 5e-145 >seq7310 Length=770 Score = 526 bits (582), Expect = 5e-145 Identities = 465/578 (80%), Gaps = 2/578 (0%) Strand=Plus/Plus Query 11593 GGTGAGCGCGTACGAGGAGACGGTGAAGCAGGAGATGAACTTTCAGAAGAGTTTCAACAA 11652 ||| | ||||||||| | |||||||| |||||||| ||||||| ||| || || | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAA 117 Query 11653 CCACGTGCGCACGTTGATCGCGCGCGAGGAGGTGGCCATCGGGCTGATGCATCTGTGGGA 11712 ||||||||||||| | | || |||||||||||||| || | ||||||||||||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11713 CTTTGTGGAGGCGTTCGTGAGCAACCCCAACAGCAAGCCTCTGACGGCGCAGCTGCTGCT 11772 |||||| ||| | | | ||||| || |||||||| || | |||||||||| | || Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11773 GATCGTGCAACATTCGCGGGACAACGAGGTGTTTAGGGAGGCGCTGCTGAACATCGCCGA 11832 || ||||| || | |||||||||||| || ||||| |||||||| ||||| | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11833 GCCCGAGGGTCGCTGGCTGCTGGACCTGATCAACATCCTGCAGAGTATCGTGGTGCAGGA 11892 ||||||||| ||||||||||| || |||| ||||| |||||||| || ||||||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11893 GCGTTCGCTGAGTCTCGGGGAGAAGGTGGCCGCCATCAATTATAGCATGTTGAGTCTGGG 11952 ||| |||| || | || |||||||||||||| || ||| |||| | |||||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11953 CAAACACTACGCCCGCAAGATTTACAAGAGCCCCTTCGTGCCCATCGACAAGGAGGTGAA 12012 ||| |||||||||||||| ||| | | ||| | ||| ||||| ||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 12013 GATCGATAGCTTTTACATGCGCATGGCCCTGAAGGTGCTGACGCTGAGCGACGACCTGGG 12072 |||||| | || |||||||||||||| |||||||||| || |||||||||||||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 12073 CGTCTACCGCAACGACCGCATCCAC-AAGGCCGTGAGCGCCAGTCGCCGGCGCGAGCTCA 12131 ||| || |||||||| ||||||||| ||||||||||||| || || ||||||||||||| Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 12132 GCGACCGCGAGCTGATGCACTGCTTGCATCGGGCGCTG 12169 |||||||||||||||||||| || |||| |||| ||| Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTG 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117684318592000