Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq51498 105 3e-18 >seq51498 Length=41259 Score = 105 bits (116), Expect = 3e-18 Identities = 132/176 (75%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATG-CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946 ||||||||| | | |||| |||||| || |||||| | ||| || | ||| | Sbjct 9076 ATTTGGACACA-TCAATGTCCAATCTTGGTTGGTCTCAACACGTTTCATGAACAGATCAG 9018 Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTT 26006 ||||||||| |||||||| | |||||| ||||| |||||| ||||| || | ||| Sbjct 9017 GAATCCACAGAGCATAAAAAAGATCTCTTGCTCTTTGTTCTTCCTTTCC-TGTGTTTTTC 8959 Query 26007 TTAG-ATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAA 26061 |||| ||| ||||||||||| || |||| ||||||||||| || || || ||||| Sbjct 8958 TTAGCATCCAAGAAATCAAAGATGTCTGCATGCCATGGTTCCAAGTAAATGGCAAA 8903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252873097979000