Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq53636 120 4e-22 >seq53636 Length=245099 Score = 120 bits (132), Expect = 4e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || || || || | || || || ||||| || || |||||||||||||| |||||| Sbjct 52900 ACTCCTATGGGTCCCATTCCTGGTCCACCACCACCGTGAGGAATACAGAATGTTTTATGT 52959 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| ||||| | ||||| | ||| || |||| ||| ||||| || |||||| Sbjct 52960 AAATTAAGATGCAAGACATCAGAACCGTAATCACCCGGTCGACAGAGACCCACTTGTGCA 53019 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| |||||||||||||| || ||||||||| || |||| |||| || ||| Sbjct 53020 TTCATATTCGCACCATCGAGATAGACTTGACCACCAGCATCGTGAATCATCTCGCACATC 53079 Query 138363 T 138363 | Sbjct 53080 T 53080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578606707582400