Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_021168.1 Length=34391 Score E Sequences producing significant alignments: (Bits) Value seq7310 455 7e-124 >seq7310 Length=770 Score = 455 bits (504), Expect = 7e-124 Identities = 456/589 (77%), Gaps = 2/589 (0%) Strand=Plus/Plus Query 10586 GTTACCGCGTACGAGCAGACGGTGAACGAGGAGCGAAACTTCCAAAAAAGCTTTAACAAT 10645 || ||||||||||| || ||||||||| ||||| ||||| | ||| |||||| ||| Sbjct 60 GTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAA-GCTTTACCAAC 118 Query 10646 CACGTTAGGACCCTGATTGCGCGAGAGGAGGTGGCCACGGGACTGATGCATCTGTGGGAT 10705 ||||| | || || | || || ||||||||||| | ||||||||||||||||||| Sbjct 119 CACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGAC 178 Query 10706 TTCATAGAGGCGTACGTACAGAATCCTACTAGCAAGCCGTTGACGGCGCAGCTGTTCTTG 10765 || || ||| | || || || | |||||||||| | | ||||||||||||| | Sbjct 179 TTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 238 Query 10766 ATAGTTCAGCACAGTCGCGACAACGAAACGTTTCGCGAGGCCATGTTAAACATCGCGGAG 10825 ||||| ||||||| | |||||||| | || | || || || ||||||| | ||| Sbjct 239 ATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 298 Query 10826 CCCGAGGGTCGGTGGTTGCTGGATCTGGTGAACATCTTGCAAAGCATAGTAGTTCAGGAG 10885 |||||||| || ||| |||| ||| || | ||||| |||| |||||||| || |||||| Sbjct 299 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 358 Query 10886 AGGAGCCTGAGCTTGGCCGATAAGGTAGCGGCTATTAACTACTCAATGCAGAGTCTGGGT 10945 | ||| ||||| |||| || ||||| || || |||||||| || |||| |||||||| Sbjct 359 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 418 Query 10946 AAATTTTACGCCCGCAAAATCTACAAGAGTCCATACGTTCCCATCGACAAAGAGGTAAAG 11005 || |||||||||||||| || ||| | | || ||||||||||| ||||| ||||||||| Sbjct 419 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 478 Query 11006 ATCGACAGCTTTTACATGCGCATGGCTCTAAAGGTGCTGACCCTCAGCGACGACCTCGGG 11065 ||||| | || |||||||||||||| | |||||||| ||| | ||||||||||| | Sbjct 479 ATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGC 538 Query 11066 GTGTACCGCAACGATCGGATACACAAA-GCTGTGAGCGCCAGCCGGCGGAGGGAACTGAG 11124 || || |||||||| || || |||||| || ||||||| ||||||||| | || || || Sbjct 539 GTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAG 598 Query 11125 CGACAGGGAGCTGATGCACAGCTTGCGAAGGGCTCTGGCGGGCGCGGGC 11173 |||| | ||||||||||||||| ||| |||||| ||||| ||| ||||| Sbjct 599 CGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGC 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109858950994320