Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq51498 96.9 3e-15 seq12393 96.9 3e-15 >seq51498 Length=41259 Score = 96.9 bits (106), Expect = 3e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 139120 CTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGA 139179 ||| |||| ||||| || | ||| | |||||| || || || || |||||||| || || Sbjct 10091 CTGAATTCCACAATCTCAGTACAAAGATTACTGCATTTTATTGTTCCTAAATTCTGATGG 10032 Query 139180 TTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGT 139239 ||| ||| | ||||||||||||||| || ||||| || ||||| |||||||| ||| Sbjct 10031 TTGGATTTCCTGTTACAAGCATCTTTATACAGCATGTATGGTGTACCAGTTTCAGTCTGT 9972 Query 139240 GTCTCTATAAT 139250 | || ||||| Sbjct 9971 GCTTCAATAAT 9961 >seq12393 Length=14882 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 139120 CTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGA 139179 ||| |||| ||||| || | ||| | ||||| || || || || |||||||| || || Sbjct 882 CTGAATTCCACAATCTCAGTACAAAGGTTACTGCATTTTATTGTTCCTAAATTCTGATGG 941 Query 139180 TTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232 ||| ||||| ||||||||||||||| || ||||| || ||||| |||||||| Sbjct 942 TTGGATTTTCTGTTACAAGCATCTTTATACAGCATGTATGGTGTACCAGTTTC 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449593244273600