Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_022266.1 Length=31967 Score E Sequences producing significant alignments: (Bits) Value seq7310 587 2e-163 >seq7310 Length=770 Score = 587 bits (650), Expect = 2e-163 Identities = 482/584 (83%), Gaps = 2/584 (0%) Strand=Plus/Plus Query 11204 GGTGACCGCGTACGAGCAGACGGTGAACGAGGAGCGGAGCTTTCAGAAAAGCTTCAACAA 11263 ||| ||||||||||| || ||||||||| ||||| | ||||| |||| |||| | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAA-GCTTTACCAA 117 Query 11264 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGGCCATCGGCCTGATGCATCTGTGGGA 11323 |||||||||||| || | || |||||||||||||| || | ||||||||||||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11324 CTTTGTGGAGGCGTACGTGCAGAACCCGTCGAGCAAGCCGCTGACGGCGCAGTTGTTCCT 11383 |||||| ||| | ||| ||||| ||||||||||| | ||||||| ||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11384 GATCGTGCAGCACAGTCGGGACAACGAGACGTTCCGCGAGGCGATGCTGAACATCGCGGA 11443 || |||||||||| ||||||||||| | ||| | || ||| |||| ||||| | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11444 GCCCGAGGGCCGCTGGCTCTTGGACCTGATTAACATCCTGCAGAGCATCGTGGTGCAGGA 11503 |||||||||||||||||| | || |||| ||||| ||||||||||| ||||||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11504 GCGCAGCCTGAGCCTGGCCGACAAGGTGGCGGCCATCAACTACAGCATGTTGAGCCTGGG 11563 ||||||| |||||||||| ||||||||||| ||||| ||||| |||| | || ||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11564 CAAGTTTTACGCCCGCAAGATCTACAAGAGCCCCTACGTGCCCATAGACAAGGAGGTGAA 11623 ||||||||||||||||||||| ||| | | ||| ||||| ||||||||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11624 GATCGACAGCTTTTACATGCGGATGGCGCTGAAAGTGCTGACGCTGAGCGACGATCTGGG 11683 |||||| | || |||||||| |||||| |||| ||||| || |||||||||| ||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11684 GGTGTACCGCAACGACCGCATCCAC-AAGGCCGTGAGCGCCAGCCGCCGGCGCGAGCTGA 11742 || || |||||||| ||||||||| ||||||||||||| ||||| ||||||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11743 GCGACCGCGAGCTGATGCACAGCCTGCGGAGGGCGCTGGCGGGC 11786 ||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGC 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102107136095760