Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq15880 105 1e-17 >seq15880 Length=18522 Score = 105 bits (116), Expect = 1e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| ||| || |||||||||||| | || || || |||||| |||||| ||||| Sbjct 8766 GATAGCTGCAGCGTTGTGGTGGTACTATTTTTCCAAGGGTATAGAACTCTTAGACACAGT 8707 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 ||||| || ||| | ||||| ||| || |||| || || || |||||||| |||| Sbjct 8706 ATTTTTTATTCTTCGCAAAAAAAATAACCAACTTAGTTTCCTTCATGTATATCACCATTC 8647 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || ||||||| || | ||| | || | |||||| |||| || ||||| Sbjct 8646 AACAATGTTTATATTGTGGTGGATTGGAGTCAAATGGGTTGCTGGTGGTCA 8596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902800042323200