Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_025678.1 Length=32661 Score E Sequences producing significant alignments: (Bits) Value seq7310 343 3e-90 >seq7310 Length=770 Score = 343 bits (380), Expect = 3e-90 Identities = 434/590 (74%), Gaps = 6/590 (1%) Strand=Plus/Plus Query 10861 GTTACTGCGTACGAGCAAACTGTGAAAGAGGAAATGAACTTTCAAAAAAGTTTTAACAAT 10920 || || |||||||| || || ||||| |||| || ||||||| ||| | |||| ||| Sbjct 60 GTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAA-GCTTTACCAAC 118 Query 10921 CATGTAAGAACTCTAATTGCCAGGGAAGAGGTGGCTATTGGCCTGATGCATCTGTGGGAC 10980 || || | || || | || | || ||||||||||| | |||||||||||||||||| Sbjct 119 CACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGAC 178 Query 10981 TTCTTGGAAGC-CTATGTA-CAAAACCCCACCAGTAAACCCCTTACCGCTCAGCtttttt 11038 || || || | | || | |||||||| | || || || || | || ||||| || Sbjct 179 TT--TGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCC 236 Query 11039 tAATTGTGCAGCACAGCCGAGACAATGAGACATTTAGGGACGCTTTGTTAAATATTGCTG 11098 | || |||||||||| | | ||||| ||| |||| ||||| || || |||| || | | Sbjct 237 TTATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAG 296 Query 11099 AGCCAGAAGGACGCTGGTTGCTCGATTTAATTAACATTTTGCAAAGTATTGTGGTCCAGG 11158 |||| || || |||||| |||||||||| || |||||| |||| || || ||||| |||| Sbjct 297 AGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGG 356 Query 11159 AAAGAAGTCTGAGTTTAGCCGATAAGGTGGCAGCCATCAATTATTCTATGCTTAGCTTAG 11218 | | || |||| | || || |||||||| ||||| || ||||| ||||| || | | Sbjct 357 AGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGG 416 Query 11219 GAAAGTTCTACGCACGAAAAATTTACAAAACTCCTTATGTTCCCATTGACAAAGAAGTAA 11278 | ||||| ||||| || || || ||| | || ||||| |||||||| ||||| || |||| Sbjct 417 GCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAA 476 Query 11279 AAATAGACAGTTTTTACATGCGAATGGCTTTAAAGGTGTTAACCTTGAGCGACGATTTGG 11338 | || || | || |||||||| ||||| || |||||| | |||||||||||||| || Sbjct 477 AGATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGA 536 Query 11339 GGGTATACAGAAATGACCGTATTCACAAA-GCAGTGAGTGCCAGTCGGCGCCGAGAACTG 11397 | || || | || || || || |||||| || ||||| | || ||||| || || || Sbjct 537 GCGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTC 596 Query 11398 AGCGACCGAGAACTGATGTACAGCTTACAGCGCGCTCTTACTGGAGCGGG 11447 |||||||| || |||||| ||||| | || | || || |||| |||| Sbjct 597 AGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGG 646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104326508843120