Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_027705.1 Length=33090 Score E Sequences producing significant alignments: (Bits) Value seq7310 167 5e-37 >seq7310 Length=770 Score = 167 bits (184), Expect = 5e-37 Identities = 334/494 (68%), Gaps = 1/494 (0%) Strand=Plus/Plus Query 12834 TAACCACGTATCAGCAGACCGTGAAGGAAGAAAAGAACTTTCAGCAAAGTTTCAACAACC 12893 ||||| |||| | || || ||||| | || | ||||||| | |||| || | ||||| Sbjct 61 TAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTG-AAAGCTTTACCAACC 119 Query 12894 ACGTCCGTACTTTAGTAGCGAGACAGGAAGTGACTGTGGGACTGATGCACCTTTGGGATT 12953 |||| || || | || || | |||| ||| || | |||||||||| || ||||| | Sbjct 120 ACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACT 179 Query 12954 TTGTGGAGGCCCTCACTGAAAACCCTTCCAGCCGCTCTCTCACTTCCCAACTTTTCCTTA 13013 |||| || || ||||||| ||| | |||| | || || ||||||| Sbjct 180 TTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTA 239 Query 13014 TACTCCAACATTCTCGCGACGACGGTGTCTTTCGCGAGTCTCTCCTTCACATCGGGGATC 13073 || | || || | | ||| ||| | || | || | || || |||| | || | Sbjct 240 TAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 299 Query 13074 CGGATGGGCGTTGGCTACTCGATCTCATTAACGTTCTACACACTATCGTGGTGCAGGAGC 13133 | || || || ||||| |||||| | || ||| |||| || | || ||||||||||||| Sbjct 300 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC 359 Query 13134 GAAACCTCAAACTGGCCGAAAAGGTGGCAGCCATCAACTACTCTGTTCTCACATTGGCTA 13193 | | | | | ||||| || |||||||| ||||| ||||| || | |||| ||| | Sbjct 360 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 419 Query 13194 AATTTTATGCGCGAAAGATCTATCACAACTATTTTGTGCCTATGGACAAAGAGGTGAAGA 13253 | ||||| || || ||||| || || | | || || || || ||||| ||||| |||| Sbjct 420 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGA 479 Query 13254 TAGCCACCTTTTACATGAGGATGGTGTTAAAAGTTCTGTGTCTGAGCGATGACTTGGGGG 13313 | | || |||||| | |||| ||| || || || ||||||| ||| || | | Sbjct 480 TCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCG 539 Query 13314 TTTATAGAAACGAG 13327 ||||| | |||||| Sbjct 540 TTTATCGCAACGAG 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105698426578880