Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_027708.1 Length=31848 Score E Sequences producing significant alignments: (Bits) Value seq7310 91.5 3e-14 >seq7310 Length=770 Score = 91.5 bits (100), Expect = 3e-14 Identities = 368/574 (64%), Gaps = 8/574 (1%) Strand=Plus/Plus Query 10117 GCTTATGAGCAGACAGTGAAGGAGGAGGTCAACTTTCAGACCTCTTTCAACAACACAGTC 10176 || || || || || ||||| ||||| | ||||||| || |||| | |||| || Sbjct 66 GCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCTTT-ACCAACCACGTG 124 Query 10177 AGAACCCTGCTGTGCCGGGAAGAGGTGGTGGTGGGCATGATGCATCTGTGGGATTTTGTG 10236 | || || || || || ||||||| | | |||||||||||||||| ||||| Sbjct 125 CGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTTGT- 183 Query 10237 CAGTCTTACT--TGGAAAATCCCCTGAGCAAGGCCCTGACGGCCCAGTTGTTTCTCATTG 10294 | || || | |||| || |||||| | || | ||| ||| |||| || || | Sbjct 184 -AATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAG 242 Query 10295 TGCAACACTGTCGGGACGAGGGGGTGCTCAGAGAGACCCTCCTCAATATCGCCGACCCCG 10354 |||| ||| ||||| | | || |||| || | || || || || | || |||| Sbjct 243 TGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCG 302 Query 10355 AGAGCAGTTGGCTGGTTGACCTTTTGAACCTGCTGCAGACGATCGTGGTGCAAGAAAGGG 10414 || || | |||||| | || | | ||| | ||||||| || |||||||| || | Sbjct 303 AGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCA 362 Query 10415 GGCTTTCCGTGGGGGAGAAGGTGGCGGCTGTAAACTACTCAGTGATCACCCTCAGCAAAC 10474 | | | ||| || |||||||| || | ||||| || || ||| || |||| Sbjct 363 GCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGT 422 Query 10475 ACTATGCCAGAAAAATCTTCAACTCGGTCTTTGTGCCCATCGACAAGGAGGCCAAGATTA 10534 || ||| | || || | | | | | || ||||| |||||||||| ||||| Sbjct 423 TTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGATCG 482 Query 10535 ATACTTTTTACATGAGGACAGTGGTGAAGCTGCTGGTGCTGAGTGATGACCTGGGCATGT 10594 | || |||||| | | | | ||||| |||| |||| || |||||| || | | Sbjct 483 AGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCGTTT 542 Query 10595 ATAGAAATGAAAGGATC--GAAAGGGCGGTCTCTGGCGCCAGGCAGCGAGAAATGAATGA 10652 || | || || | ||| ||||| || | | ||| ||| ||| || | | || Sbjct 543 ATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCC-GGCGGCGCGAGCTCAGCGA 601 Query 10653 CAGGGAACTGATGTATAGTTTGAGAAAGGCCCTG 10686 | | || |||||| | || || || ||||||| Sbjct 602 CCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTG 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101726580826400