Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 100 4e-16 >seq1 Length=778493 Score = 100 bits (110), Expect = 4e-16 Identities = 135/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||| || | | ||| |||||||| |||||| || ||| ||||| ||||||| || | Sbjct 567013 CCTCATCCCTGCTGATAAGTTCATTAGAGAAGGTCAAACCAGGCATCAGACCCCTTTTTT 566954 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||||||||||||| | | ||| ||||||||||| |||||||| || ||| ||||| | Sbjct 566953 TCAACCAGAAAATTGAAGCAAACGAGCCAGAGAAAAAGATCCCTTCAACAGCAGCGAATG 566894 Query 130155 CAAAGAGACGCTCAGCAAAGGAGCGGGACTTT--GTATCAAACCACTTCATCGCCCACTG 130212 | | | || ||| || || | || | | | | || | ||| |||| |||||||| Sbjct 566893 CCACAACCCGTTCACCATAG--GTGGCATTGTCAGCATTGATCCAGTTCAATGCCCACTG 566836 Query 130213 CGCCTT 130218 ||||| Sbjct 566835 TGCCTT 566830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618016828587200