Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_028103.1 Length=32939 Score E Sequences producing significant alignments: (Bits) Value seq7310 417 2e-112 >seq7310 Length=770 Score = 417 bits (462), Expect = 2e-112 Identities = 447/588 (76%), Gaps = 2/588 (0%) Strand=Plus/Plus Query 10909 GTGACGGCTTACGAACAAACCGTGAAAGAAGAAATGAACTTTCAAAAAAGCTTTAATAAC 10968 || || || |||||||| || ||||| | || || ||||||| ||| |||||| ||| Sbjct 60 GTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAA-GCTTTACCAAC 118 Query 10969 CACGTGCGAACTTTGATAGCAAGGGAGGAGGTGGCAATAGGACTAATGCATCTTTGGGAT 11028 |||||||| || | | ||| | ||||||||||| ||| |||| |||||||| ||||| Sbjct 119 CACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGAC 178 Query 11029 TTTTTGGAGGCGTATGTTCAGAATCCCACCAGCAAGCCGCTGACCGCTCAACTTTTCTTA 11088 ||| | ||| | || || || | ||||||||||| | || || || ||| | Sbjct 179 TTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 238 Query 11089 ATTGTGCAACACAGCAGAGACAACGAGACATTTAGAGATGCGCTTTTAAACATAGCAGAA 11148 || ||||| |||| ||| ||||||||| |||| || |||||||| ||||||||| ||| Sbjct 239 ATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 298 Query 11149 CCAGAAGGACGGTGGTTGCTAGACTTGATTAACATTCTTCAGAGCATAGTGGTACAGGAA 11208 || || || || ||| |||| || ||||| |||||||| |||||||||||||| ||||| Sbjct 299 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 358 Query 11209 CGTAGCCTGAGTTTGGCCGACAAGGTTGCGGCCATTAACTACTCCATGTTAAGTTTGGGA 11268 || ||| |||| |||| |||||||| || ||||||||||| |||||| | ||| |||| Sbjct 359 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 418 Query 11269 AAGTTTTACGCGCGTAAAATTTACAAGACCCCTTACGTGCCCATTGACAAAGAAGTAAAA 11328 ||||||||||| || || || ||| | ||||||||||| ||||| ||||| || ||||| Sbjct 419 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 478 Query 11329 ATTGATAGTTTTTACATGAGAATGGCCTTGAAAGTGCTAACCCTCAGCGACGACTTGGGC 11388 || || | || |||||| | ||||| ||||| ||||| ||| | ||||||||| || || Sbjct 479 ATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGC 538 Query 11389 ATCTACCGGAACGATCGCATTCAC-AAGGCGGTCAGCGCCAGCCGCCGTCGGGAGTTGAG 11447 | || || ||||| ||||| ||| ||||| || |||| ||||| || || ||| | || Sbjct 539 GTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAG 598 Query 11448 TGACAGAGAATTGATGTACAGTTTGCAGCGGGCGCTGACGGGAACTGG 11495 ||| | || ||||| |||| |||| |||| ||| | || || || Sbjct 599 CGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGG 646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105215537119440