Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_028105.1 Length=35159 Score E Sequences producing significant alignments: (Bits) Value seq7310 545 5e-151 >seq7310 Length=770 Score = 545 bits (604), Expect = 5e-151 Identities = 529/676 (78%), Gaps = 8/676 (1%) Strand=Plus/Plus Query 10951 GGTGACGGCCTACGAGCAGACGGTGAACGAGGAGCGCAACTTTCAAAAGAGCTTCAACAA 11010 ||| || || ||||| || ||||||||| ||||| ||||||| || ||||| | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAA 117 Query 11011 CCACGTGCGCACCCTCGTGGCCCGGGAGGAGGTGGCGATCGGGCTGATGCACCTGTGGGA 11070 |||||||||||| || ||||| || ||||||||||| || | |||||||| |||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11071 CTTTGTGGAGGCGTTCGTGCACAACCCGAGCAGCAAGCCCCTGACGGCGCAGCTGTTTCT 11130 |||||| ||| | | ||| ||||| | |||||||| || | |||||||||||| || Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11131 AATCGTGCAACACAGCCGCGATAACGAGATCTTCCGCGACGCGCTGTTAAACATTGCGGA 11190 || ||||| |||| | | || |||||| ||| | || |||||| ||||||| | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11191 GCCCGAGGGCCGCTGGTTGCTGGATCTTATTAACATCTTGCAGAGCATCGTAGTGCAGGA 11250 |||||||||||||||| |||| ||| | || ||||| |||||||||| || |||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11251 ACGGGCGCTGAGTCTGGCCGAGAAGGTGGCGGCCATCAACTACTCGATGCTGAGCCTGGG 11310 || |||| ||||| || |||||||| ||||| ||||| || ||||| || ||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11311 CAAGTTTTACGCTCGCAAGATTTACAAGAGCCCCTTCGTGCCCATTGACAAGGAGGTGAA 11370 |||||||||||| |||||||| ||| | | ||| | ||| ||||| ||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11371 AATAGACAGCTTTTACATGCGCATGGCCCTAAAGGTGCTGACGCTGAGCGACGACCTGGG 11430 || || | || |||||||||||||| | |||||||| || |||||||||||||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11431 GGTGTACCGCAACGACCGCATCCAC-AAGGCGGTGAGCGCCAGCCGCCGGCGCGAGCTGA 11489 || || |||||||| ||||||||| ||||| ||||||| ||||| ||||||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11490 GCGACCGCGAGCTGATGCTGAGCCTGCGCCGCGCGCTGGC-----CGGG-ACCGGCGACG 11543 |||||||||||||||||| ||||||| | || ||||| |||| | |||||| Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 11544 AGGAGCGCGAGTCTTACTTTGACGCGGGCGCCGACCTCCGATGGCAGCCCAGCGCGCGCG 11603 ||| |||||| ||||||||||||||||| ||||| || ||| || ||| |||| Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 11604 CCTTGGAAGCGGCCGG 11619 || || |||| || || Sbjct 718 CCCTGTAAGCAGCTGG 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112314971556240