Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_028107.1 Length=34064 Score E Sequences producing significant alignments: (Bits) Value seq7310 434 2e-117 >seq7310 Length=770 Score = 434 bits (480), Expect = 2e-117 Identities = 451/589 (77%), Gaps = 2/589 (0%) Strand=Plus/Plus Query 10592 GTCACCGCATACGAGCAGACGGTGAACGAGGAGCTTAACTTCCAAAAAAGCTTTAACAAC 10651 || ||||| ||||| || ||||||||| ||||| ||||||| | ||| |||||| |||| Sbjct 60 GTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAA-GCTTTACCAAC 118 Query 10652 CACGTTAGGACCCTGATAGCGCGAGAGGAGGTGGCCACGGGGCTGATGCATCTGTGGGAT 10711 ||||| | || || | || || ||||||||||| | | ||||||||||||||||| Sbjct 119 CACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGAC 178 Query 10712 TTCATAGAGGCCTACGTACAGAATCCTACTAGCAAGCCGTTAACGGCACAGCTGTTTTTG 10771 || || || | || || || | |||||||||| | | ||| |||||||| | Sbjct 179 TTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 238 Query 10772 ATAGTGCAGCACAGTCGCGACAACGAAACCTTTCGCGAGGCCATGTTAAACATCGCGGAG 10831 ||||||||||||| | |||||||| | || | || || || ||||||| | ||| Sbjct 239 ATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 298 Query 10832 CCCGAGGGTCGGTGGTTGTTGGATTTGGTTAACATCTTGCAAAGTATAGTAGTTCAGGAG 10891 |||||||| || ||| || | |||||| | ||||| |||| || ||||| || |||||| Sbjct 299 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 358 Query 10892 AGGAGCTTGAGCTTGGCCGACAAGGTGGCGGCTATCAATTACTCGATGCAGAGTCTGGGT 10951 | ||||||||| |||| ||||||||||| || || || || || |||| |||||||| Sbjct 359 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 418 Query 10952 AAATTCTACGCCCGCAAAATTTACAAGAGTCCATACGTGCCCATTGACAAAGAGGTAAAG 11011 || || ||||||||||| || ||| | | || ||||| ||||| ||||| ||||||||| Sbjct 419 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 478 Query 11012 ATCGACAGCTTTTACATGCGCATGGCTTTAAAGGTGCTGACTCTTAGCGACGATCTCGGG 11071 ||||| | || |||||||||||||| || |||||||| || | |||||||| || | Sbjct 479 ATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGC 538 Query 11072 GTGTACCGCAACGATCGGATACAC-AAGGCCGTGAGCGCCAGCCGGCGGCGGGAGTTGAG 11130 || || |||||||| || || ||| ||||||||||||| ||||||||||| ||| | || Sbjct 539 GTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAG 598 Query 11131 CGACAGGGAACTGATGCACAGCTTGCGAAGGGCTCTCGCGGGTGCGGGC 11179 |||| | || |||||||||||| ||| |||||| || || || ||||| Sbjct 599 CGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGC 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108813223489440