Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq29267 116 4e-21 >seq29267 Length=189138 Score = 116 bits (128), Expect = 4e-21 Identities = 87/102 (85%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530 ||||| |||| |||| ||||| || |||||||| ||||| ||||| ||||| |||||||| Sbjct 14587 CATTGAAAATGTGAAAGCTAAGATCCAGGACAAAGAGGGCATTCCACCAGATCAGCAGCG 14528 Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 ||| ||||| |||||||||||||| || |||| |||||||| Sbjct 14527 TCTCATTTTCGCTGGTAAGCAACTGGAAGATGGCCGTACCCT 14486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569924585014400