Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_028113.1 Length=35685 Score E Sequences producing significant alignments: (Bits) Value seq7310 509 4e-140 >seq7310 Length=770 Score = 509 bits (564), Expect = 4e-140 Identities = 468/589 (79%), Gaps = 7/589 (1%) Strand=Plus/Plus Query 11061 AGCTTTAACAACCACGTGCGCACGCTGGTGGCGCGCGAGGAGGTGGCCATCGGGCTGATG 11120 ||||||| |||||||||||||||||| ||||| |||||||||||||| || | |||||| Sbjct 107 AGCTTTACCAACCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATG 166 Query 11121 CACCTGTGGGACTTTGTGGAGGCGTTCGTGCACAACCCCGGCAGCAAGGCGCTGACGGCG 11180 || |||||||||||||| ||| | | ||| ||||| |||||| |||| | |||| Sbjct 167 CATCTGTGGGACTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCG 226 Query 11181 CAGCTGTTTCTAATCGTGCAGCACAGTCGCGACAACGAGCTGTTTCGCGACGCCCTGCTA 11240 |||||||| || || |||||||||| | ||||||||| || | || || |||||| Sbjct 227 CAGCTGTTCCTTATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTA 286 Query 11241 AACATCGCCGAGCCCGAGGGCCGGTGGCTGCTGGACCTGATTAACATCTTGCAGAGCATT 11300 ||||| | |||||||||||||| |||||||| || |||| ||||| |||||||||| Sbjct 287 AACATAGTAGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATA 346 Query 11301 GTGGTGCAAGAGCGCTCGCTCAGCCTGGCCGACAAGGTGGCGGCCATCAACTATTCGATG 11360 |||||||| |||||| | |||||||| ||||||||||| ||||| |||||||| ||| Sbjct 347 GTGGTGCAGGAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATG 406 Query 11361 CTGAGCCTGGGCAAGTTTTACGCGCGCAAAATCTACCGCAGCCCGTACGTGCCCATCGAT 11420 || || ||||||||||||||||| ||||| || |||| | ||| ||||| ||||| || Sbjct 407 CTCAGTCTGGGCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGAC 466 Query 11421 AAGGAGGTGAAGATCGATAGCTTTTACATGCGGATGGCCCTGAAGGTGCTGACGCTGAGC 11480 |||||||| |||||||| | || |||||||| ||||| |||||||||| || ||||| Sbjct 467 AAGGAGGTAAAGATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGC 526 Query 11481 GACGACCTGGGCGTGTACCGCAACGACCGCATTCAC-AAGGCGGTGAGCGCCAGCCGCCG 11539 ||||||||| |||| || |||||||| ||||| ||| ||||| ||||||| ||||| || Sbjct 527 GACGACCTGAGCGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCG 586 Query 11540 GCGCGAGCTGAGTGACCGGGAGCTGCTGCACAGCCTGC----GCCGCGCGTTGGCCGGGG 11595 ||||||||| || ||||| |||||| |||||||||||| | | | | |||| ||| Sbjct 587 GCGCGAGCTCAGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGG 646 Query 11596 C--GGGGGATGCCGAGCGCGAGGCGTACTTTGAGGCGGGGGCGGACCTG 11642 | || ||| ||| |||| | |||||||| ||||| || |||||| Sbjct 647 CAGCGGCGATAGAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTG 695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113997089805680