Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq9446 109 4e-19 >seq9446 Length=604 Score = 109 bits (120), Expect = 4e-19 Identities = 236/353 (67%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 71361 ATTATAGTTTTTAATGTATTTTTCGACAATATCTATTACAATATGATTAGAGCTATTAAG 71420 |||||| | ||||||| |||| ||||||| | ||| | ||| || | || Sbjct 595 ATTATAAAATATAATGTAATTTTTAACAATATTTGTTATACTATCCTTGTTGTATTTTCT 536 Query 71421 CTGATTATTGATGTAAAAAGTTTCAGACTTTAGCGAGGAATGAAAACTTTCTATCGGGGC 71480 | || || || ||||| ||||||| |||||| ||| ||||| | ||| || ||| Sbjct 535 CCTATCATGGAGATAAAAGGTTTCAGTCTTTAGGACGGAGTGAAACCATTCAATACAGGC 476 Query 71481 GTTATCAGCAGGTGTTCCCTTTCGGGACATACTTCTGATAATGCCTTTTTCTTCGCATAA 71540 ||||| || ||||||||||| ||||||||| | | | ||||||||||| ||| Sbjct 475 ATTATCTGCTGGTGTTCCCTTACGGGACATAGAGCGGGTGATGCCTTTTTCCGTGCAAGC 416 Query 71541 TTGATAATAAGCATAAGATGTATAAACGCTGCCTTGATCACTATGTAATATACACCCCTC 71600 ||||| ||||| | ||| || || || ||| ||||| || ||||| | || | Sbjct 415 CTGATAGTAAGCCTTAGAAGTGTAGACTGAGCCCTGATCGCTGTGTAAGAGTGCTCCATT 356 Query 71601 GGGTATATCGATTTGATTTAATGTATCATTAACTAAACTTTGGTCTTGTTTATCATCTAT 71660 ||||| | | |||||| | || || || ||| | ||| || ||| || Sbjct 355 GGGTAATTTCAGTTGATTAAGGGTGTCTAGTACAAAATCTGTGTCCTGACAATCTGAGAT 296 Query 71661 TTTATACGCCACAATTTCTCCGTTATAAATATCCATTATCGAAGATAAATACA 71713 |||| || | ||| |||| |||||| | ||||| || ||||| | ||||| Sbjct 295 AGTATAAGCTATAATCTCTCGGTTATAGAGGTCCATAATTGAAGAGAGATACA 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408328893602840