Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_029898.1 Length=37545 Score E Sequences producing significant alignments: (Bits) Value seq7310 280 4e-71 >seq7310 Length=770 Score = 280 bits (310), Expect = 4e-71 Identities = 398/555 (72%), Gaps = 6/555 (1%) Strand=Plus/Plus Query 10712 ACGGCCTACGAGCAGACGGCGCGCGAGGAAGCCAACTTTCAAAAGACCTTCAACAATAAC 10771 || || ||||| || |||| | | |||| ||||||| || | ||| | ||| || Sbjct 63 ACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAACCAC 121 Query 10772 GTGCGCACGCTGGTGGCGCGCGAGGAGGTGACCATCGGTCTGATGCACCTGTGGGACTTT 10831 ||||||||||| ||||| |||||||||||| | || | |||||||| |||||||||||| Sbjct 122 GTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTT 181 Query 10832 ACGGAGGCGTACGTGAGCAA--CCCGAGCAGCAAGACGCTGACGGCGCAGCTGTTCCTGA 10889 | | || | |||||| ||| | |||||| |||| | ||||||||||||||| | Sbjct 182 --GTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTA 239 Query 10890 TCGCCCAGCACTCGCGCGACGAGGGGGTGTTCAAGGAGAGCCTGCTGACGTTGGCGGAGC 10949 | | |||||| | | ||| | | || |||| ||| ||||| | | | |||| Sbjct 240 TAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 299 Query 10950 CCGAGAGTCAGTGGCTGGTGGACCTGATTAACATCCTGCAGTCCATCATCGTGCAAGAGC 11009 ||||| | | |||||| | || |||| ||||| |||||| ||| | ||||| |||| Sbjct 300 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC 359 Query 11010 GGGGGATGCGGGTGCCCGAGAAGGTGGCGGCCATCAACTACAGCCTGATCAGCCTGGCGA 11069 | | || | || | || |||||||| ||||| ||||| | || |||| |||| | Sbjct 360 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 419 Query 11070 AGCACTACGCGCGCCAGCTGTTTAAGACGGCGTACGTGCCGCTGGACAAGGAGGTGAAGA 11129 || ||||| ||| || | | | || | ||||| || | ||||||||||| |||| Sbjct 420 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGA 479 Query 11130 TCCAGACGTTTTACATGCGCACGGTGATCAAGCTGCTGGCGCTGAGCGACGACCTGGGCA 11189 || || ||| |||||||||| || | | ||| |||| | |||||||||||||| || Sbjct 480 TCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCG 539 Query 11190 TCTACCGCAACGAGCGCATCCA-GCGGGTGGTGAGCGCGTCGCGCCGCCGCGAGCTGAGC 11248 | || ||||||||||||||||| || ||||||| | || || |||||||| ||| Sbjct 540 TTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGC 599 Query 11249 GACAGGGAGCTGATG 11263 ||| | ||||||||| Sbjct 600 GACCGCGAGCTGATG 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119945264604080