Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_029902.1 Length=38073 Score E Sequences producing significant alignments: (Bits) Value seq7310 271 2e-68 >seq7310 Length=770 Score = 271 bits (300), Expect = 2e-68 Identities = 396/555 (71%), Gaps = 6/555 (1%) Strand=Plus/Plus Query 10715 ACGGCCTACGAGCAGACGGCGCGCGAGGAAGCCAACTTCCAAAAGACCTTCAACAATAAC 10774 || || ||||| || |||| | | |||| ||||| | || | ||| | ||| || Sbjct 63 ACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAACCAC 121 Query 10775 GTGCGCACGCTGGTGGCGCGTGAGGAGGTGACCATCGGTCTGATGCACCTGTGGGACTTT 10834 ||||||||||| ||||| || ||||||||| | || | |||||||| |||||||||||| Sbjct 122 GTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTT 181 Query 10835 ACGGAGGCGTACGTGAGCAA--CCCGAGCAGCAAGACGCTGACGGCGCAGCTGTTCCTGA 10892 | | || | |||||| ||| | |||||| |||| | ||||||||||||||| | Sbjct 182 --GTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTA 239 Query 10893 TCGCCCAGCACTCGCGCGACGAGGGGGTGTTCAAGGAGAGCCTGCTGACGTTGGCGGAGC 10952 | | |||||| | | ||| | | || |||| ||| ||||| | | | |||| Sbjct 240 TAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 299 Query 10953 CCGAGAGTCAGTGGCTGGTGGACCTGATTAACATCCTGCAGTCCATCATCGTGCAAGAGC 11012 ||||| | | |||||| | || |||| ||||| |||||| ||| | ||||| |||| Sbjct 300 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC 359 Query 11013 GGGGGATGCGGGTGCCCGAGAAGGTGGCGGCCATCAACTACAGCCTGATCAGCCTGGCGA 11072 | | || | || | || |||||||| ||||| ||||| | || |||| |||| | Sbjct 360 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 419 Query 11073 AGCACTACGCGCGCCAGCTGTTTAAGACGGCGTACGTGCCGCTGGACAAGGAGGTGAAGA 11132 || ||||| ||| || | | | || | ||||| || | ||||||||||| |||| Sbjct 420 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGA 479 Query 11133 TCCAGACGTTTTACATGCGCACGGTGATCAAGCTGCTGGCGCTGAGCGACGACCTGGGCA 11192 || || ||| |||||||||| || | | ||| |||| | |||||||||||||| || Sbjct 480 TCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCG 539 Query 11193 TCTACCGCAACGAGCGCATCCA-GCGGGTGGTGAGCGCGTCGCGCCGCCGCGAGCTGAGC 11251 | || ||||||||||||||||| || ||||||| | || || |||||||| ||| Sbjct 540 TTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGC 599 Query 11252 GACAGGGAGCTGATG 11266 ||| | ||||||||| Sbjct 600 GACCGCGAGCTGATG 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121633778740400