Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_031948.1 Length=31481 Score E Sequences producing significant alignments: (Bits) Value seq7310 136 8e-28 >seq7310 Length=770 Score = 136 bits (150), Expect = 8e-28 Identities = 321/481 (67%), Gaps = 3/481 (1%) Strand=Plus/Plus Query 10095 GTTACAGCTTATGAACAAACAGTGAATGAGGAAGTGAACTTTCAGACCTCGTTTAACAAC 10154 || || || || ||||| || ||||| |||| | ||||||| || | |||| |||| Sbjct 60 GTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGC-TTTACCAAC 118 Query 10155 AATGTGCGCACGCTAATAGCCAGAGAGGAAGTGGTGGTAGGGCTGATGCATCTTTGGGAC 10214 | ||||||||||| | || | ||||| |||| || | ||||||||||| |||||| Sbjct 119 CACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGAC 178 Query 10215 TTTGTCCAGGCCTATTTAG-AGAACCCAATTAGCAAGGCTCTGACAGCACAGCTTTTTCT 10273 ||||| || | || | ||||||| ||||||| | || | || ||||| || || Sbjct 179 TTTGTAATCGCGC-TGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 10274 CATCGTGCAACACTGCAGAGATGAGGGGGTATTACGGGAAAGCTTGCTTAATATTGCAGA 10333 || ||||| ||| ||| || | | || ||| |||| |||| || || | ||| Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 10334 GCCGGAAAGCAGGTGGCTGGTGGACCTGTTGAACCTGCTGCAGACAATAGTTGTGCAGGA 10393 ||| || || | |||||| | || || | ||| | ||||||| ||||| |||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 10394 GCGGGGCCTCTCGGTGGGAGAGAAAGTGGCTGCCATCAATTACTCAGTAATTACTCTAAG 10453 ||| || | ||| || || ||||| ||||| || || || | | | ||| | Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 10454 CAAACATTATGCTAGGAAGATTTTCAACTCTGTGTTTGTACCTATTGATAAGGAAGCCAA 10513 ||| ||| || | ||||| | | | | | || || || || ||||| | || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 10514 AATCAACACCTTCTACATGCGGGCTGTGGTTAAGTTGCTGGTGCTGAGCGATGACCTGGG 10573 ||| | ||||||||||| | | | ||| |||| ||||||| |||||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 10574 C 10574 | Sbjct 538 C 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100552935583920