Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= NC_032105.1 Length=33562 Score E Sequences producing significant alignments: (Bits) Value seq7310 504 2e-138 >seq7310 Length=770 Score = 504 bits (558), Expect = 2e-138 Identities = 460/578 (80%), Gaps = 2/578 (0%) Strand=Plus/Plus Query 10833 GGTCAGCGCGTACGAGCAGACGGTGAAGGAGGAGATGAACTTCCAAAAGAGCTTTAACCA 10892 ||| | ||||||||| || |||||||| ||||||| ||||| | || ||||||| | | Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAA 117 Query 10893 CCACGTCCGCACCCTGATCGCGCGAGAGGAGGTGGCCATCGGGTTGATGCATCTGTGGGA 10952 |||||| ||||| || | || || ||||||||||| || | |||||||||||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 10953 CTTTGTGGAGGCTTTCGTGCAGAATCCCACCAGCAAGCCCCTGACGGCTCAGCTCTTTCT 11012 |||||| || | | ||| || || | |||||||| || | ||| ||||| || || Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11013 GATCGTGCAACACAGCCGCGAGAACGAGGCGTTTAGGGAGGCCATGCTTAACATCGCGGA 11072 || ||||| |||| | | || |||||||| || ||||| || |||| ||||| | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11073 GCCCGAGGGCCGCTGGCTCTTGGACCTGATTAACATCCTGCAGAGCATCGTGGTCCAGGA 11132 |||||||||||||||||| | || |||| ||||| ||||||||||| ||||| ||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11133 GCGCTCGCTGAGTCTGGCCGACAAGGTGGCGGCCATCAACTACAGCATGCTGTCCCTGGG 11192 |||| |||| ||||| ||||||||||| ||||| ||||| |||||| ||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11193 CAAGTTTTACGCCCGCAAGATCTACAAGACCCCGTTCGTCCCCATAGACAAGGAGGTGAA 11252 ||||||||||||||||||||| ||| | ||||| | ||| ||||||||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11253 GATAGACAGCTTTTACATGCGCATGGCGCTGAAGGTCCTGACTCTGAGCGACGATCTGGG 11312 ||| || | || ||||||||||||||| ||||||| || || |||||||||| ||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11313 CGTGTACCGCAACGACCGTATCCAC-AAGGCGGTGAGCGCCAGCCGCCGGCGCGAACTGA 11371 ||| || |||||||| || |||||| ||||| ||||||| ||||| |||||||| || | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11372 GCGATCGCGAGCTGATGCACAGCTTGCATCGGGCCCTG 11409 |||| |||||||||||||||||| |||| |||||||| Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTG 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107207855882560